RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HEATR9A2RTY3 570 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 BTBD17A6NE02 478 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 TMEM110-MUSTN1A8MSY1 372 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 A8MXQ7 604 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 IDSB3KWA1 339 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 HAS3O00219 553 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 DFNA5O60443 496 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 KLHL41O60662 606 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 RAMP3O60896 148 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 PPIAL4FP0DN26 164 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 MCF2P10911 925 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 TNNI1P19237 187 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 POLR2EP19388 210 aaKnown RBP2.16□□□□□ -2.06
RFC4-213ENST00000489028 NTSP30990 170 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 RDXP35241 583 aaKnown RBP2.16□□□□□ -2.06
RFC4-213ENST00000489028 NUDT1P36639 197 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 LEPP41159 167 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 PRMT2P55345 433 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 PKNOX1P55347 436 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 BST2Q10589 180 aaKnown RBP2.16□□□□□ -2.06
RFC4-213ENST00000489028 SRSF5Q13243 272 aaKnown RBP2.16□□□□□ -2.06
RFC4-213ENST00000489028 GPNMBQ14956 572 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 HSP90AB3PQ58FF7 597 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 DMRTC1Q5HYR2 192 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 KDM7AQ6ZMT4 941 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 DNM1P46Q6ZS02 220 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 GDPD3Q7L5L3 318 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 DHDDSQ86SQ9 333 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 TRIM69Q86WT6 500 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 NRMQ8IXM6 262 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 SVOPLQ8N434 492 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 OR52I1Q8NGK6 324 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 NEIL3Q8TAT5 605 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 RAB3IL1Q8TBN0 382 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 RAPGEF5Q92565 580 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 SEC22AQ96IW7 307 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 MTMR9Q96QG7 549 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 ARHGDIGQ99819 225 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 NCOR1P1Q9H4R4 102 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 VCPKMTQ9H867 229 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 ZDHHC11Q9H8X9 412 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 ZFP14Q9HCL3 533 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 NT5MQ9NPB1 228 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 B3GNT2Q9NY97 397 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 ANGPTL2Q9UKU9 493 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 CLSPNQ9HAW4 1339 aa2.16□□□□□ -2.06
RFC4-213ENST00000489028 TRBV6-6A0A0A6YYG2 114 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 A0A1B0GUS0 222 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 A0A1B0GWB2 263 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 KIF2AO00139 706 aaPredicted RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 HIP1O00291 1037 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 FOXE1O00358 373 aaPredicted RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 MAGEB4O15481 346 aaPredicted RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 SNAI2O43623 268 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 UGT1A9O60656 530 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 KRT14P02533 472 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ETS2P15036 469 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 RCC1P18754 421 aaPredicted RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 GALP22466 123 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 CD1CP29017 333 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 IL12AP29459 219 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 CALCRP30988 508 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 CASP14P31944 242 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 CRYBB2P43320 205 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 QARSP47897 775 aaKnown RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 TPMTP51580 245 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 PRRX1P54821 245 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 UNC119Q13432 240 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ARL6IP1Q15041 203 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 PRAMEF20Q5VT98 475 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 CARD17Q5XLA6 110 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 RNASEKQ6P5S7 137 aaKnown RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 ENPP6Q6UWR7 440 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 UNQ9370/PRO34162Q6UXP9 181 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 HSDL2Q6YN16 418 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ARCQ7LC44 396 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 OR2L13Q8N349 312 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ZNF740Q8NDX6 193 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 SPATA4Q8NEY3 305 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 OR9A1PQ8NGU1 263 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 MARCH1Q8TCQ1 289 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 STARD4Q96DR4 205 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ZNF641Q96N77 438 aaPredicted RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 RIOK1Q9BRS2 568 aaKnown RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 TRIM62Q9BVG3 475 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 NUP58Q9BVL2 599 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 RBKSQ9H477 322 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 REEP4Q9H6H4 257 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 NARFLQ9H6Q4 476 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 NMRAL1Q9HBL8 299 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 SH2D2AQ9NP31 389 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 ERVW-1Q9UQF0 538 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 RPL36Q9Y3U8 105 aaKnown RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 PEX16Q9Y5Y5 336 aa2.15□□□□□ -2.07
RFC4-213ENST00000489028 MTCL1Q9Y4B5 1905 aaKnown RBP2.15□□□□□ -2.07
RFC4-213ENST00000489028 LRRIQ4A6NIV6 560 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 UPK3AO75631 287 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 SLITRK3O94933 977 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 INSP01308 110 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms