RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TRAF3IP2O43734 574 aaPredicted RBP16.5■□□□□ 0.23
PTCD3-217ENST00000488801 GMNNO75496 209 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 HPRP00739 348 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 TSPAN19P0C672 248 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 SNTB1Q13884 538 aaKnown RBP16.5■□□□□ 0.23
PTCD3-217ENST00000488801 DNAL1Q4LDG9 190 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 Q6ZT83 130 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 CREB3L2Q70SY1 520 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 H1FNTQ75WM6 255 aaPredicted RBP16.5■□□□□ 0.23
PTCD3-217ENST00000488801 STK32CQ86UX6 486 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 TMEM239Q8WW34 195 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 ZNF775Q96BV0 537 aaPredicted RBP16.5■□□□□ 0.23
PTCD3-217ENST00000488801 CLPTM1LQ96KA5 538 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 OR10A4Q9H209 315 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 C20orf141Q9NUB4 165 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 CRIM1Q9NZV1 1036 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 PRSS50Q9UI38 385 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 ZNF229Q9UJW7 825 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 TESMINQ9Y4I5 508 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 POLQO75417 2590 aa16.5■□□□□ 0.23
PTCD3-217ENST00000488801 MAST4O15021 2626 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 FAM221AA4D161 298 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 ENO4A6NNW6 628 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 CYSRT1A8MQ03 144 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 MS4A18H0YCH9 400 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 PDLIM1O00151 329 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 ACOT8O14734 319 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 PRF1P14222 555 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 RHCEP18577 417 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 GTF2E2P29084 291 aaKnown RBP16.49■□□□□ 0.23
PTCD3-217ENST00000488801 YAP1P46937 504 aaKnown RBP16.49■□□□□ 0.23
PTCD3-217ENST00000488801 TRAM2Q15035 370 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 MS4A18Q3C1V0 323 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 OR5J2Q8NH18 312 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 PFN4Q8NHR9 129 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 APH1AQ96BI3 265 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 OXGR1Q96P68 337 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 BTBD10Q9BSF8 475 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 FUZQ9BT04 418 aa16.49■□□□□ 0.23
PTCD3-217ENST00000488801 A0A1W2PRQ8 180 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 KPNA4O00629 521 aaPredicted RBP16.48■□□□□ 0.23
PTCD3-217ENST00000488801 PLPP3O14495 311 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 ZNF432O94892 652 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 CH25HO95992 272 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 MAGEA2P43356 314 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 KIR2DL3P43628 341 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 LSM11P83369 360 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTCD3-217ENST00000488801 DGCR6Q14129 220 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 P2RY6Q15077 328 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 TMEM225Q6GV28 225 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 CYP2R1Q6VVX0 501 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.48■□□□□ 0.23
PTCD3-217ENST00000488801 GPAT4Q86UL3 456 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 THTPAQ9BU02 230 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 FNDC11Q9BVV2 318 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 ASPNQ9BXN1 380 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 KLHL4Q9C0H6 718 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 NMNAT1Q9HAN9 279 aaPredicted RBP16.48■□□□□ 0.23
PTCD3-217ENST00000488801 RHCGQ9UBD6 479 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 RCE1Q9Y256 329 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 V9GYQ6 96 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 LRBAP50851 2863 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 PDZD2O15018 2839 aa16.48■□□□□ 0.23
PTCD3-217ENST00000488801 A0A087WUU8 490 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 HTR3EA5X5Y0 456 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 TUBAL3A6NHL2 446 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 C16orf97H3BN30 126 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 GYG2O15488 501 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 PIP5K1CO60331 668 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 MRPL33O75394 65 aaKnown RBP16.47■□□□□ 0.23
PTCD3-217ENST00000488801 CBLP22681 906 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 PUDPQ08623 228 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 ZP4Q12836 540 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 EXOC3L2Q2M3D2 409 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 FBXW9Q5XUX1 488 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 CASP12Q6UXS9 341 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 C22orf34Q6ZV56 151 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 PIWIL3Q7Z3Z3 882 aaKnown RBP16.47■□□□□ 0.23
PTCD3-217ENST00000488801 CXorf67Q86X51 503 aaPredicted RBP16.47■□□□□ 0.23
PTCD3-217ENST00000488801 DHFR2Q86XF0 187 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 KDM8Q8N371 416 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 LRRC17Q8N6Y2 441 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 LINC01560Q8TB33 94 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 SLC7A13Q8TCU3 470 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 ACOT11Q8WXI4 607 aaPredicted RBP16.47■□□□□ 0.23
PTCD3-217ENST00000488801 DACH2Q96NX9 599 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 IL1RAPQ9NPH3 570 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 NANSQ9NR45 359 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 PARPBPQ9NWS1 579 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 TAS2R5Q9NYW4 299 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 GPR52Q9Y2T5 361 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 MED31Q9Y3C7 131 aa16.47■□□□□ 0.23
PTCD3-217ENST00000488801 SH3D21A4FU49 640 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 OR7A10O76100 309 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 EPXP11678 715 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 IGHV1-2P23083 117 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 IFNA8P32881 189 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms