RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 KAT8Q9H7Z6 458 aaKnown RBP2.98□□□□□ -1.93
ITGB1-214ENST00000488427 COG4Q9H9E3 785 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 LPAR2Q9HBW0 351 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 L3MBTL1Q9Y468 752 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 DYSFO75923 2080 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 IGHV7-81A0A0B4J1V7 117 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 RNF103-CHMP3A0A140T963 221 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 PINLYPA6NC86 204 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 CCER2I3L3R5 266 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TRDMT1O14717 391 aaKnown RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 IDH1O75874 414 aaKnown RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 BCAS2O75934 225 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 LDOC1O95751 146 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 MT-ATP6P00846 226 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 SEMG1P04279 462 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ALPPP05187 535 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ANXA4P09525 319 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ZNF853P0CG23 659 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ALPPL2P10696 532 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 THRBP10828 461 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 CPN1P15169 458 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 CYP11B1P15538 503 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 IL10P22301 178 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 DUSP3P51452 185 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ZNF45Q02386 682 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 KLRB1Q12918 225 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ILKQ13418 452 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 UFSP1Q6NVU6 142 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 SYT10Q6XYQ8 523 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 WDR88Q6ZMY6 472 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 HSD17B13Q7Z5P4 300 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 KRTAP11-1Q8IUC1 163 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TGIF2LYQ8IUE0 185 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 RNF148Q8N7C7 305 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 LINC01555Q8NAE3 123 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 STKLD1Q8NE28 680 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ADAMTS16Q8TE57 1224 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 NEIL2Q969S2 332 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TCEAL4Q96EI5 215 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 ZNF799Q96GE5 643 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TECTBQ96PL2 329 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TAAR1Q96RJ0 339 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 SLC30A2Q9BRI3 323 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TMEM175Q9BSA9 504 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 TBC1D10AQ9BXI6 508 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 COMMD4Q9H0A8 199 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 NANOGQ9H9S0 305 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 MEPEQ9NQ76 525 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 C1orf123Q9NWV4 160 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 DCDC2Q9UHG0 476 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 MMP17Q9ULZ9 603 aa2.97□□□□□ -1.93
ITGB1-214ENST00000488427 PRG3Q9Y2Y8 225 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-214ENST00000488427 PLXNA2O75051 1894 aa2.96□□□□□ -1.93
ITGB1-214ENST00000488427 NFASCO94856 1347 aa2.96□□□□□ -1.93
ITGB1-214ENST00000488427 LRP4O75096 1905 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 WASH3PC4AMC7 463 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 IMPA2O14732 288 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 CASKO14936 926 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 RRASP10301 218 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 GCFC2P16383 781 aaKnown RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ARF4P18085 180 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 U2AF2P26368 475 aaKnown RBP eCLIP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ATP6V1E1P36543 226 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF133P52736 654 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 NAPAP54920 295 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 SLC26A5P58743 744 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 SP4Q02446 784 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 CFAP221Q4G0U5 840 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF57Q68EA5 555 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 OR6B2Q6IFH4 312 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF544Q6NX49 715 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 WASH2PQ6VEQ5 465 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 Q6ZVH6 145 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 TRPM8Q7Z2W7 1104 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 BIVMQ86UB2 503 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ERI1Q8IV48 349 aaKnown RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF713Q8N859 430 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 OR10H4Q8NGA5 316 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 SDR42E1Q8WUS8 393 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 NUS1Q96E22 293 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 MTMR9Q96QG7 549 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 RIOK1Q9BRS2 568 aaKnown RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 TNMDQ9H2S6 317 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 MARCH5Q9NX47 278 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 P2RX2Q9UBL9 471 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 IL20RAQ9UHF4 553 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 RNF6Q9Y252 685 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 WDR45Q9Y484 360 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 PPIAL4AQ9Y536 164 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 CITO14578 2027 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 COL27A1Q8IZC6 1860 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 TRIP11Q15643 1979 aa2.96□□□□□ -1.94
ITGB1-214ENST00000488427 MDC1Q14676 2089 aaKnown RBP2.96□□□□□ -1.94
ITGB1-214ENST00000488427 LAD1O00515 517 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 RASGRF2O14827 1237 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 STX11O75558 287 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 MMP23AO75900 390 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 TSPAN8P19075 237 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 ATP5A1P25705 553 aaKnown RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 DPP4P27487 766 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms