RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ATP6AP1Q15904 470 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 DGUOKQ16854 277 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 RABL6Q3YEC7 729 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 RNF165Q6ZSG1 346 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 KRTAP11-1Q8IUC1 163 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 UBE2J2Q8N2K1 259 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 C20orf203Q8NBC4 194 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 OR6C4Q8NGE1 309 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 FAM110BQ8TC76 370 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 N4BP2L2Q92802 583 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 FBXO32Q969P5 355 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 RPUSD4Q96CM3 377 aaKnown RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 ITCHQ96J02 903 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 SLC35E1Q96K37 410 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 IFT74Q96LB3 600 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 MYCBPQ99417 103 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 RIOK1Q9BRS2 568 aaKnown RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 PPA2Q9H2U2 334 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 ANKRD19PQ9H560 264 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 KCNIP1Q9NZI2 227 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 NEUROG3Q9Y4Z2 214 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 N6AMT1Q9Y5N5 214 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 PEX16Q9Y5Y5 336 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 A0A1W2PPE3 182 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 CCDC182A6NF36 153 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 SLC2A3P11169 496 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ATP1B2P14415 290 aaPredicted RBP2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ETS2P15036 469 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 GYG1P46976 350 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 GSSP48637 474 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ATP5IP56385 69 aaPredicted RBP2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ACTR3P61158 418 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 BST1Q10588 318 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 NRF1Q16656 503 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ZNF630Q2M218 657 aaPredicted RBP2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 BOLA3Q53S33 107 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 HSP90AB3PQ58FF7 597 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 PAGE3Q5JUK9 113 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 RFLNAQ6ZTI6 216 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 NANOGNBQ7Z5D8 188 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ZNF546Q86UE3 836 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 PLA2G4DQ86XP0 818 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 EGFL6Q8IUX8 553 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 PNKDQ8N490 385 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 NECAB1Q8N987 351 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ACOT4Q8N9L9 421 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 DCAF4L2Q8NA75 395 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 LINC01555Q8NAE3 123 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 FNDC5Q8NAU1 212 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 OR9G1Q8NH87 305 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 PYROXD1Q8WU10 500 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 FAM151AQ8WW52 585 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 PANX2Q96RD6 677 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 KCNA7Q96RP8 456 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 CNN2Q99439 309 aaKnown RBP2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 FMO2Q99518 471 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 NRIP2Q9BQI9 281 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 GBA3Q9H227 469 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 RNF167Q9H6Y7 350 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ASB8Q9H765 288 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 NANOGQ9H9S0 305 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 IL26Q9NPH9 171 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 GIN1Q9NXP7 522 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 ANAPC11Q9NYG5 84 aa2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 MTRF1LQ9UGC7 380 aaKnown RBP2.41□□□□□ -2.02
SNRNP27-204ENST00000487029 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.02
SNRNP27-204ENST00000487029 FRMPD3Q5JV73 1810 aa2.4□□□□□ -2.02
SNRNP27-204ENST00000487029 PPIAL4EA0A075B759 164 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RBMY1BA6NDE4 496 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RBMY1EA6NEQ0 496 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 UBXN8O00124 270 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 NPIPB7O75200 414 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 OR7A10O76100 309 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 NDUFB10O96000 172 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 MMP1P03956 469 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RBMY1DP0C7P1 496 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RBMY1A1P0DJD3 496 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PPIAL4FP0DN26 164 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ICAM2P13598 275 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RPS2P15880 293 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ABOP16442 354 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 MSNP26038 577 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PBLDP30039 288 aaPredicted RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 FMO3P31513 532 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 TPMTP51580 245 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ERVK-25P63136 954 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 DMTNQ08495 405 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 LRRC74AQ0VAA2 488 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 DAZ2Q13117 558 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 GK3PQ14409 553 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF77Q15935 545 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 SSX2Q16385 188 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PRAMEF5Q5TYX0 476 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 GPR157Q5UAW9 335 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PRAMEF6Q5VXH4 476 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 LRRC31Q6UY01 552 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 LRRC74BQ6ZQY2 392 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 TAS2R42Q7RTR8 314 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 TPRX1Q8N7U7 411 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms