RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SLC7A5P1Q8MH63 180 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 TSLPQ969D9 159 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ADIPOR1Q96A54 375 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 MVB12AQ96EY5 273 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 PDCD1LG2Q9BQ51 273 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 PCED1AQ9H1Q7 454 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 RPRD1BQ9NQG5 326 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ANKRD61A6NGH8 418 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 INMT-MINDY4F8WBC2 141 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 SERPINI2O75830 405 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 SNRPBP14678 240 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 SDHAP31040 664 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 UQCRC1P31930 480 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 CTXN1P60606 82 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 HSD17B12Q53GQ0 312 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF684Q5T5D7 378 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 SYT9Q86SS6 491 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 EXD3Q8N9H8 876 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 LSM14AQ8ND56 463 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF721Q8TF20 911 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 RXFP3Q9NSD7 469 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 CA14Q9ULX7 337 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 MOKQ9UQ07 419 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 RNF215Q9Y6U7 377 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 TTC28Q96AY4 2481 aa16.38■□□□□ 0.21
PDLIM7-207ENST00000486828 C4orf47A7E2U8 309 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF879B4DU55 563 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 SDC3O75056 442 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 CPNE3O75131 537 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 UBL3O95164 117 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 DDAH2O95865 285 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 TXNDC12O95881 172 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ARSBP15848 533 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 NXPH1P58417 271 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 LTBQ06643 244 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 PLA1AQ53H76 456 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 NUP54Q7Z3B4 507 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF524Q96C55 264 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ADOQ96SZ5 270 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 LAT2Q9GZY6 243 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ABCG5Q9H222 651 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 C12orf10Q9HB07 376 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 BRD7Q9NPI1 651 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 TEKT2Q9UIF3 430 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 CACNG2Q9Y698 323 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 A0A1B0GVT2 93 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 TCEA1P23193 301 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 BTG1P62324 171 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 HSD11B2P80365 405 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 PITPNAQ00169 270 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ELAVL1Q15717 326 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC16A9Q7RTY1 509 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC35F3Q8IY50 421 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 OR4D9Q8NGE8 314 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF563Q8TA94 476 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 NECAB3Q96P71 396 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 SMAD5Q99717 465 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 ADAM19Q9H013 955 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 UCKL1Q9NWZ5 548 aa16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 PAQR5Q9NXK6 330 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 AK6Q9Y3D8 172 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-207ENST00000486828 A0A0B4J203 849 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 FAM171A2A8MVW0 826 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 PRR32B1ATL7 298 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 IDSB3KWA1 339 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 ICOSLGO75144 302 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 TACR3P29371 465 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 GRPRP30550 384 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 LCN1P31025 176 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC6A8P48029 635 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 DCAF7P61962 342 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 RRAS2P62070 204 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 EMC4Q5J8M3 183 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC6A19Q695T7 634 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 BICRALQ6AI39 1079 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 PRR22Q8IZ63 422 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 YIPF7Q8N8F6 280 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 ASCC1Q8N9N2 400 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 HAVCR2Q8TDQ0 301 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 LPAR4Q99677 370 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 NOX4Q9NPH5 578 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 DHCR7Q9UBM7 475 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 SPATA2Q9UM82 520 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF281Q9Y2X9 895 aa16.36■□□□□ 0.21
PDLIM7-207ENST00000486828 BTCP35070 178 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 MMP15P51511 669 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 OR1D5P58170 312 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 RPL6Q02878 288 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC36A2Q495M3 483 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 BAIAP2L2Q6UXY1 529 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 LIX1LQ8IVB5 337 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 CARFQ8N187 725 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 C17orf50Q8WW18 174 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 RNF166Q96A37 237 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 KTI12Q96EK9 354 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 CMTM3Q96MX0 182 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 TSSK2Q96PF2 358 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 GAL3ST4Q96RP7 486 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms