RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SMIM30A4D0T7 59 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 NTN3O00634 580 aaPredicted RBP18.48■□□□□ 0.55
HPS3-206ENST00000486530 ADAM10O14672 748 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 PYCR1P32322 319 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 MPLP40238 635 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 HSF2Q03933 536 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 GPR139Q6DWJ6 353 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 DMKNQ6E0U4 476 aaPredicted RBP18.48■□□□□ 0.55
HPS3-206ENST00000486530 POMZP3Q6PJE2 187 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TMEM205Q6UW68 189 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 OR5L2Q8NGL0 311 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 OR5J2Q8NH18 312 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 DUSP19Q8WTR2 217 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 ZNRF4Q8WWF5 429 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TMCO6Q96DC7 493 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 CPNE5Q9HCH3 593 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 RPRD1BQ9NQG5 326 aaKnown RBP18.48■□□□□ 0.55
HPS3-206ENST00000486530 MOKQ9UQ07 419 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TMED7Q9Y3B3 224 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TTC28Q96AY4 2481 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 DMDP11532 3685 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 SHISA3A0PJX4 238 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 MEN1O00255 615 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 SUSD5O60279 629 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 F13BP05160 661 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 NAGAP17050 411 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 PPP3R1P63098 170 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 E2F1Q01094 437 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 SLC3A1Q07837 685 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 TCEAL6Q6IPX3 200 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 C16orf47Q6ZP98 133 aaPredicted RBP18.47■□□□□ 0.55
HPS3-206ENST00000486530 MAMDC2Q7Z304 686 aaPredicted RBP18.47■□□□□ 0.55
HPS3-206ENST00000486530 TCEAL3Q969E4 200 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 PGLYRP3Q96LB9 341 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 TSPAN32Q96QS1 320 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 ALG12Q9BV10 488 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 ST6GALNAC2Q9UJ37 374 aa18.47■□□□□ 0.55
HPS3-206ENST00000486530 SELENOFO60613 162 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 HTR3AP46098 478 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 GBX2P52951 348 aaPredicted RBP18.46■□□□□ 0.55
HPS3-206ENST00000486530 HCCSP53701 268 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 SUMO3P55854 103 aaPredicted RBP18.46■□□□□ 0.55
HPS3-206ENST00000486530 CAV3P56539 151 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 FBXW4P57775 412 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 COL28A1Q2UY09 1125 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 TP53I3Q53FA7 332 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 LINC01590Q5TEZ4 76 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 MRPL14Q6P1L8 145 aaKnown RBP18.46■□□□□ 0.55
HPS3-206ENST00000486530 C5orf46Q6UWT4 87 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 PRR23CQ6ZRP0 262 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 MS4A15Q8N5U1 240 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 EXD3Q8N9H8 876 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 DRAXINQ8NBI3 349 aaPredicted RBP18.46■□□□□ 0.55
HPS3-206ENST00000486530 SNX33Q8WV41 574 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 TMEM234Q8WY98 164 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 HGDQ93099 445 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 LOXL4Q96JB6 756 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 PTDSS2Q9BVG9 487 aa18.46■□□□□ 0.55
HPS3-206ENST00000486530 TMEM72A0PK05 275 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 A8MVM7 634 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 NPIPB7O75200 414 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 HNRNPCP07910 306 aaKnown RBP eCLIP18.46■□□□□ 0.54
HPS3-206ENST00000486530 ZNF79Q15937 498 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 FAM69AQ5T7M9 428 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 LCN10Q6JVE6 187 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 DBX2Q6ZNG2 339 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 STK35Q8TDR2 534 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 THAP3Q8WTV1 239 aaPredicted RBP18.46■□□□□ 0.54
HPS3-206ENST00000486530 PELI1Q96FA3 418 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 DIRAS2Q96HU8 199 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 CTRCQ99895 268 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 SRRQ9GZT4 340 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 WDR54Q9H977 334 aa18.46■□□□□ 0.54
HPS3-206ENST00000486530 NXT1Q9UKK6 140 aaKnown RBP18.46■□□□□ 0.54
HPS3-206ENST00000486530 SPEGQ15772 3267 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 ANKUB1A6NFN9 424 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 TMEM200CA6NKL6 621 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 OGG1O15527 345 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 ZNF354AO60765 605 aaPredicted RBP18.45■□□□□ 0.54
HPS3-206ENST00000486530 SC5DO75845 299 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 C17orf67Q0P5P2 114 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 SGCBQ16585 318 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 GLYR1Q49A26 553 aaPredicted RBP18.45■□□□□ 0.54
HPS3-206ENST00000486530 MESTQ5EB52 335 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 AGAP7PQ5VUJ5 663 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 MZT2AQ6P582 158 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 RPTNQ6XPR3 784 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 ADGRG3Q86Y34 549 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 AGBL5Q8NDL9 886 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 TTC9Q92623 222 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 KIAA1143Q96AT1 154 aaPredicted RBP18.45■□□□□ 0.54
HPS3-206ENST00000486530 ATF6BQ99941 703 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 TTTY10Q9BZA0 68 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 RNF32Q9H0A6 362 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 NCDNQ9UBB6 729 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 COPS3Q9UNS2 423 aa18.45■□□□□ 0.54
HPS3-206ENST00000486530 ZFAND5O76080 213 aa18.44■□□□□ 0.54
HPS3-206ENST00000486530 RENP00797 406 aa18.44■□□□□ 0.54
HPS3-206ENST00000486530 SERPINA3P01011 423 aa18.44■□□□□ 0.54
HPS3-206ENST00000486530 CD1AP06126 327 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms