RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MRTO4Q9UKD2 239 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-208ENST00000486159 RPH3AQ9Y2J0 694 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-208ENST00000486159 GPR55Q9Y2T6 319 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-208ENST00000486159 AKAP6Q13023 2319 aa8.44□□□□□ -1.06
TMEM39A-208ENST00000486159 HTR3EA5X5Y0 456 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CDHR4A6H8M9 788 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TUBAL3A6NHL2 446 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CLCA1A8K7I4 914 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 SIAH2O43255 324 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ZIC3O60481 467 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TSPAN2O60636 221 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 REM1O75628 298 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 KCNK2O95069 426 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ATE1O95260 518 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TGM6O95932 706 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 GASTP01350 101 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TMIGD3P0DMS9 266 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 EPXP11678 715 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CYP4B1P13584 511 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 POLR2IP36954 125 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 LHX2P50458 406 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 GAS1P54826 345 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CDH15P55291 814 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CLDN15P56746 228 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PSG6Q00889 435 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PIN1Q13526 163 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 DAZAP2Q15038 168 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 NPTX1Q15818 432 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF141Q15928 474 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PGBD2Q6P3X8 592 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PODNL1Q6PEZ8 512 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 KLHL17Q6TDP4 642 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF836Q6ZNA1 936 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 KCTD8Q6ZWB6 473 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PLEKHM3Q6ZWE6 761 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 NUP54Q7Z3B4 507 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF440Q8IYI8 595 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PM20D2Q8IYS1 436 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 RNF113BQ8IZP6 322 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 C17orf47Q8NEP4 570 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 OR4K5Q8NGD3 323 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 OR9Q2Q8NGE9 314 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 OR14L1PQ8NHC6 308 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PIGXQ8TBF5 258 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 FAM222BQ8WU58 562 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 ACOT11Q8WXI4 607 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 FCGR1BQ92637 280 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 MYDGFQ969H8 173 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 EFHD2Q96C19 240 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 HS6ST2Q96MM7 605 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 SECISBP2Q96T21 854 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TSC22D3Q99576 134 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 MCHR1Q99705 422 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 NIPSNAP1Q9BPW8 284 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 BCL7BQ9BQE9 202 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TEX12Q9BXU0 123 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 RSPO3Q9BXY4 272 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 OR2B2Q9GZK3 357 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 DLL4Q9NR61 685 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 RLIMQ9NVW2 624 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 GALNT8Q9NY28 637 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 PTTG2Q9NZH5 202 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 RSL24D1Q9UHA3 163 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 MKLN1Q9UL63 735 aa8.43□□□□□ -1.06
TMEM39A-208ENST00000486159 TRAPPC13A5PLN9 417 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 FRG2CA6NGY1 282 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SHISA8B8ZZ34 492 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 FAM47E-STBD1D6RA91 191 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 FAM20BO75063 409 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 HRGP04196 525 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 DRD5P21918 477 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 CHMP24386 653 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 DNASE1P24855 282 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 KRT20P35900 424 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PPICP45877 212 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 TMED10P49755 219 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SUCLG1P53597 346 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 GFRA1P56159 465 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 CLDN18P56856 261 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 B3GALT5-AS1P59052 145 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SNRPGP62308 76 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SLC35A2P78381 396 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PRR20EP86478 221 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PRR20CP86479 221 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PRR20DP86480 221 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PRR20BP86481 221 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PRR20AP86496 221 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 FAM27E3Q08E93 113 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 TSPAN31Q12999 210 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 PTGES3Q15185 160 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SEC23BQ15437 767 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 GPR68Q15743 365 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 CNPY1Q3B7I2 92 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SLC25A30Q5SVS4 291 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SLX4IPQ5VYV7 408 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 LAIR2Q6ISS4 152 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 SLC30A6Q6NXT4 461 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF613Q6PF04 617 aa8.42□□□□□ -1.06
TMEM39A-208ENST00000486159 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms