RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 RAB3IPQ96QF0 476 aaPredicted RBP11.02□□□□□ -0.65
HMG20B-211ENST00000486028 CDRT15Q96T59 188 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 ASPNQ9BXN1 380 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 POLDIP3Q9BY77 421 aaKnown RBP11.02□□□□□ -0.65
HMG20B-211ENST00000486028 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 RASSF1Q9NS23 344 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 RPS6KA6Q9UK32 745 aa11.02□□□□□ -0.65
HMG20B-211ENST00000486028 CREBBPQ92793 2442 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 FREM1Q5H8C1 2179 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 POLQO75417 2590 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 FAM221AA4D161 298 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 B2RBV5 119 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 M0R082 166 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 FZD7O75084 574 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 MT-ATP6P00846 226 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 SERPINA1P01009 418 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 THY1P04216 161 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 THRBP10828 461 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 NCK1P16333 377 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF43P17038 809 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 GGT1P19440 569 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 CBLP22681 906 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 GRPRP30550 384 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 NTF4P34130 210 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 KRTAP10-9P60411 292 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 SLC25A3Q00325 362 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 PMS2P3Q13401 168 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 C1DQ13901 141 aaKnown RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 POU4F3Q15319 338 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 SPATS1Q496A3 300 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 IFI44LQ53G44 452 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 GLYATQ6IB77 296 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 CREB3L2Q70SY1 520 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 CBLL1Q75N03 491 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 TSPYL5Q86VY4 417 aaPredicted RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZIC4Q8N9L1 334 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 SCAIQ8N9R8 606 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ADPRHL1Q8NDY3 354 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF417Q8TAU3 575 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 GEMIN6Q8WXD5 167 aaKnown RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 TMEM45BQ96B21 275 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZC3HAV1LQ96H79 300 aaKnown RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF587Q96SQ5 575 aaPredicted RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 SLC19A3Q9BZV2 496 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 CLEC4MQ9H2X3 399 aaPredicted RBP11.01□□□□□ -0.65
HMG20B-211ENST00000486028 ASB6Q9NWX5 421 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 UPB1Q9UBR1 384 aa11.01□□□□□ -0.65
HMG20B-211ENST00000486028 LOC102725191A0A1B0GVB3 256 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 OR6C65A6NJZ3 312 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 IGHV3-9P01782 118 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 BGLAPP02818 100 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HIST1H2ABP04908 130 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 IFNW1P05000 195 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HSD17B1P14061 328 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 PTNP21246 168 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 CRYGSP22914 178 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 EDNRAP25101 427 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 RBM34P42696 430 aaKnown RBP11□□□□□ -0.65
HMG20B-211ENST00000486028 IL1RL1Q01638 556 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 PIN1Q13526 163 aaPredicted RBP11□□□□□ -0.65
HMG20B-211ENST00000486028 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HIST3H2AQ7L7L0 130 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
HMG20B-211ENST00000486028 EPHX4Q8IUS5 362 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 DEFB107AQ8IZN7 70 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 KDM8Q8N371 416 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 RNF148Q8N7C7 305 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HSD17B8Q92506 261 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HIST1H2ACQ93077 130 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 S100PBPQ96BU1 408 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 HS6ST2Q96MM7 605 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 MOGAT1Q96PD6 335 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF385AQ96PM9 386 aaKnown RBP11□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF426Q9BUY5 554 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 GORASP2Q9H8Y8 452 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 MRPL39Q9NYK5 338 aaKnown RBP11□□□□□ -0.65
HMG20B-211ENST00000486028 CD300AQ9UGN4 299 aa11□□□□□ -0.65
HMG20B-211ENST00000486028 CIB4A0PJX0 185 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 LYZL6O75951 148 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 KRT33AO76009 404 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 OR6A2O95222 327 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 CH25HO95992 272 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 HRGP04196 525 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 TCN1P20061 433 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-211ENST00000486028 COX5AP20674 150 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 CALB2P22676 271 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 IGHV1-2P23083 117 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 LTBQ06643 244 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 ST3GAL3Q11203 375 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 FAPQ12884 760 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 FOXD4Q12950 439 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-211ENST00000486028 TSC22D1Q15714 1073 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF74Q16587 644 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 ABHD12BQ7Z5M8 362 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-211ENST00000486028 P2RY8Q86VZ1 359 aa10.99□□□□□ -0.65
HMG20B-211ENST00000486028 POMGNT2Q8NAT1 580 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms