RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DCTN3O75935 186 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 MT-ATP6P00846 226 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 BGLAPP02818 100 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 COX5AP20674 150 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 MPGP29372 298 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 SELENOPP49908 381 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 P2RY4P51582 365 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 ACKR1Q16570 336 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 HMBOX1Q6NT76 420 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 KLHL17Q6TDP4 642 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 ZNF704Q6ZNC4 412 aaPredicted RBP11.03□□□□□ -0.64
PTCD1-205ENST00000485746 FKBP9P1Q75LS8 142 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 LRRC37BQ96QE4 947 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 ALG2Q9H553 416 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 SEC14L4Q9UDX3 406 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 MALT1Q9UDY8 824 aa11.03□□□□□ -0.64
PTCD1-205ENST00000485746 FBN2P35556 2912 aa11.02□□□□□ -0.64
PTCD1-205ENST00000485746 A0A1W2PPR1 153 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 ZNF726A6NNF4 738 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 C11orf98E9PRG8 122 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 NME4O00746 187 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 ATE1O95260 518 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 CH25HO95992 272 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 ADORA3P0DMS8 318 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 GSK3BP49841 420 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 SELENOWP63302 87 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 CARD17Q5XLA6 110 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 EPHX4Q8IUS5 362 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 SCAIQ8N9R8 606 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 ADPRHL1Q8NDY3 354 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 OR5J2Q8NH18 312 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 AKAP1Q92667 903 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTCD1-205ENST00000485746 CCL19Q99731 98 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 POLR2J2Q9GZM3 115 aaKnown RBP11.02□□□□□ -0.65
PTCD1-205ENST00000485746 POLR2J3Q9H1A7 115 aaKnown RBP11.02□□□□□ -0.65
PTCD1-205ENST00000485746 NANSQ9NR45 359 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 MRPL39Q9NYK5 338 aaKnown RBP11.02□□□□□ -0.65
PTCD1-205ENST00000485746 GMPR2Q9P2T1 348 aaKnown RBP11.02□□□□□ -0.65
PTCD1-205ENST00000485746 TAGLN3Q9UI15 199 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 RNF115Q9Y4L5 304 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 CENPEQ02224 2701 aa11.02□□□□□ -0.65
PTCD1-205ENST00000485746 LRRN3E7EW58 273 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 MS4A18H0YCH9 400 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 M0R1B8 84 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 RNF13O43567 381 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 SMPD2O60906 423 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 OR5F1O95221 314 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 WNT11O96014 354 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PLAUP00749 431 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 SERPINA1P01009 418 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 ITGA5P08648 1049 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 ZNF83P51522 516 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 CRYBA2P53672 197 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 FOXG1P55316 489 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-205ENST00000485746 POU3F1Q03052 451 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-205ENST00000485746 LTBQ06643 244 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PUDPQ08623 228 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PIN1Q13526 163 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-205ENST00000485746 GABRA6Q16445 453 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 DEFB113Q30KQ7 82 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 MS4A18Q3C1V0 323 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 NCMAPQ5T1S8 102 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 C20orf204Q6ZNR8 217 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PIGWQ7Z7B1 504 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PIK3C3Q8NEB9 887 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PIGTQ969N2 578 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 HS6ST2Q96MM7 605 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 MUS81Q96NY9 551 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 MOGAT1Q96PD6 335 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 CCT8L2Q96SF2 557 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 FOXC2Q99958 501 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 SLC19A3Q9BZV2 496 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 PCDHAC1Q9H158 963 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 SPAG4Q9NPE6 437 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 B3GAT2Q9NPZ5 323 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 POU2F3Q9UKI9 436 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 RCE1Q9Y256 329 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 AMDHD2Q9Y303 409 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
PTCD1-205ENST00000485746 BLOC1S5-TXNDC5H3BN57 136 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 PLPP3O14495 311 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 HS3ST1O14792 307 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 LYPD3O95274 346 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 THY1P04216 161 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 IFNW1P05000 195 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 NCK1P16333 377 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 CD53P19397 219 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 LOXP28300 417 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 YAP1P46937 504 aaKnown RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 PRPS1P60891 318 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 BSPH1Q075Z2 132 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms