RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 BBOX1O75936 387 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 SUPT7LO94864 414 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 IGHV2-5P01817 119 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 P04436 131 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 KLK3P07288 261 aaPredicted RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 ZNF19P17023 458 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 FDFT1P37268 417 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 SUCLG1P53597 346 aaKnown RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 IRX3P78415 501 aaPredicted RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 MRPL28Q13084 256 aaKnown RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 MARCH8Q5T0T0 291 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 KDM7AQ6ZMT4 941 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 UTS2BQ765I0 119 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 ERI1Q8IV48 349 aaKnown RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 RAB3IL1Q8TBN0 382 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 MARC2Q969Z3 335 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 RPUSD4Q96CM3 377 aaKnown RBP3.55□□□□□ -1.84
SRRM1-213ENST00000485441 PLEKHA8Q96JA3 519 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 MS4A4EQ96PG1 132 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 MBOAT4Q96T53 435 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 NARFLQ9H6Q4 476 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 CLCF1Q9UBD9 225 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 GTF3C1Q12789 2109 aa3.55□□□□□ -1.84
SRRM1-213ENST00000485441 FAM47DPA6NHR8 397 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 FGF1P05230 155 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 UBTFL1P0CB47 393 aaPredicted RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 GABRR1P24046 479 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 RDXP35241 583 aaKnown RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 YAP1P46937 504 aaKnown RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 TLE4Q04727 773 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 GPNMBQ14956 572 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 LRRC31Q6UY01 552 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 RIOK2Q9BVS4 552 aaKnown RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 POLR2J2Q9GZM3 115 aaKnown RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 ACTR6Q9GZN1 396 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 POLR2J3Q9H1A7 115 aaKnown RBP3.54□□□□□ -1.84
SRRM1-213ENST00000485441 KLHL28Q9NXS3 571 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 SLC2A8Q9NY64 477 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 ASF1AQ9Y294 204 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 CDH10Q9Y6N8 788 aa3.54□□□□□ -1.84
SRRM1-213ENST00000485441 PLEKHG1Q9ULL1 1385 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 CDHR2Q9BYE9 1310 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 FANCIQ9NVI1 1328 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 KIR2DL5BA0A0G2JN68 375 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 KIR2DL5BA0A0G2JPC4 375 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 CCDC182A6NF36 153 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 USP27XA6NNY8 438 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 HAT1O14929 419 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 MCF2P10911 925 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 COX7A1P24310 79 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 BTCP35070 178 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 GLP1RP43220 463 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ARRB1P49407 418 aaPredicted RBP3.53□□□□□ -1.84
SRRM1-213ENST00000485441 PRMT2P55345 433 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 SELENOTP62341 195 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 CCNA1P78396 465 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ENPEPQ07075 957 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ATP6AP1Q15904 470 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ZNF79Q15937 498 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 METAP1DQ6UB28 335 aaPredicted RBP3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ZNF571Q7Z3V5 609 aaPredicted RBP3.53□□□□□ -1.84
SRRM1-213ENST00000485441 C11orf53Q8IXP5 236 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 KIR2DL5AQ8N109 375 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ZNF740Q8NDX6 193 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 KIR2DL5BQ8NHK3 375 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 NEIL3Q8TAT5 605 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 PYROXD1Q8WU10 500 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 ACOT11Q8WXI4 607 aaPredicted RBP3.53□□□□□ -1.84
SRRM1-213ENST00000485441 TMEM246Q9BRR3 403 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 MFFQ9GZY8 342 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 CTNNA3Q9UI47 895 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 TRAF3IP3Q9Y228 551 aa3.53□□□□□ -1.84
SRRM1-213ENST00000485441 LTBP1Q14766 1721 aa3.53□□□□□ -1.85
SRRM1-213ENST00000485441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.52□□□□□ -1.85
SRRM1-213ENST00000485441 A8MUA0 341 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 AGPAT2O15120 278 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 EMC8O43402 210 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 TOM1O60784 492 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 ERLIN1O75477 346 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 HPNP05981 417 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 CHTF8P0CG12 524 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 CD1EP15812 388 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 ZNF43P17038 809 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 FUT3P21217 361 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 HNRNPH3P31942 346 aaKnown RBP3.52□□□□□ -1.85
SRRM1-213ENST00000485441 RBMXP38159 391 aaKnown RBP3.52□□□□□ -1.85
SRRM1-213ENST00000485441 CTRLP40313 264 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 NPBWR2P48146 333 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 ORC2Q13416 577 aaPredicted RBP3.52□□□□□ -1.85
SRRM1-213ENST00000485441 CTRB2Q6GPI1 263 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
SRRM1-213ENST00000485441 PAQR7Q86WK9 346 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 C20orf203Q8NBC4 194 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 OR6C4Q8NGE1 309 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 KCNG3Q8TAE7 436 aa3.52□□□□□ -1.85
SRRM1-213ENST00000485441 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms