RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 METTL8Q9H825 291 aaKnown RBP4.78□□□□□ -1.64
CCDC39-205ENST00000485055 C10orf88Q9H8K7 445 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 SPHK1Q9NYA1 384 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 FRRS1LQ9P0K9 344 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 PIGLQ9Y2B2 252 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 OR10H1Q9Y4A9 318 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 CHD8Q9HCK8 2581 aa4.78□□□□□ -1.64
CCDC39-205ENST00000485055 SPEGQ15772 3267 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 A0A0A6YYH2 397 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 IGKV1-8A0A0C4DH67 115 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FAM187AA6NFU0 413 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 A6NJ64 397 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MCIDASD6RGH6 385 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 PPIAL4DF5H284 164 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 M0QXV9 152 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 IDH3BO43837 385 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 NME2P1O60361 137 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TSPAN12O95859 305 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 C1QAP02745 245 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 GP1BBP13224 206 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ICAM2P13598 275 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 HLA-DMAP28067 261 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 BDKRB2P30411 391 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SERPINB1P30740 379 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CRHR1P34998 444 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FOLR3P41439 243 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SLC1A2P43004 574 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 RAP2BP61225 183 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 C2orf54Q08AI8 447 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 HSPB3Q12988 150 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MFAP5Q13361 173 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SERTAD2Q14140 314 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 DCAF10Q5QP82 559 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 Q6ZPB1 254 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ASB18Q6ZVZ8 466 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF761Q86XN6 746 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 GPALPP1Q8IXQ4 340 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ZBED8Q8IZ13 594 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 IQCKQ8N0W5 287 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 LRRC17Q8N6Y2 441 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OR10Z1Q8NGY1 313 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 M1APQ8TC57 530 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CD200R1Q8TD46 325 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 UBTD2Q8WUN7 234 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FAR1Q8WVX9 515 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ATG4AQ8WYN0 398 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TM9SF4Q92544 642 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 GTPBP3Q969Y2 492 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 IMMP1LQ96LU5 166 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 C10orf90Q96M02 699 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF778Q96MU6 729 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OPALINQ96PE5 141 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OSBPL9Q96SU4 736 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OR2B2Q9GZK3 357 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 DIABLOQ9NR28 239 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF639Q9UID6 485 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ASF1AQ9Y294 204 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TP53TG5Q9Y2B4 290 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TBL2Q9Y4P3 447 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MDC1Q14676 2089 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 HEATR5BQ9P2D3 2071 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ANKRD11Q6UB99 2663 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 IGF2RP11717 2491 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 A0A087X0K7 114 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CDC14CA4D256 554 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 E7ENX8 843 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 NBR2O15453 112 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 PLPP2O43688 288 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SLC28A2O43868 658 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OR1I1O60431 355 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ENTPD5O75356 428 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OR2B3O76000 313 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 HAUS5O94927 633 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TFP02787 698 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CATP04040 527 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 GAPDHP04406 335 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FAM87AP0C7U9 286 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 AP3S2P59780 193 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ATP6V0D1P61421 351 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 HERV-K104P63124 156 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CAV1Q03135 178 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SCRN3Q0VDG4 424 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TRAM2Q15035 370 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 SYTL3Q4VX76 610 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 C19orf54Q5BKX5 351 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FAM122CQ6P4D5 195 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 GPR135Q8IZ08 494 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 ARHGAP24Q8N264 748 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 LIX1Q8N485 282 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CLDN19Q8N6F1 224 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MFSD9Q8NBP5 474 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 OR6X1Q8NH79 312 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 C1orf54Q8WWF1 131 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 UTP4Q969X6 686 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms