RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TIMP4Q99727 224 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 ADGRL4Q9HBW9 690 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 KLHL1Q9NR64 748 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 INPP5EQ9NRR6 644 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 HPF1Q9NWY4 346 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 FBXL2Q9UKC9 423 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 VDAC3Q9Y277 283 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 A0A087WZY1 265 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TEX13CA0A0J9YWL9 993 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 CDRT15L2A8MXV6 281 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 PLPP3O14495 311 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 SNPHO15079 494 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 F13BP05160 661 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 CPEP16870 476 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 ATP6V1E1P36543 226 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 DIO1P49895 249 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 POU4F2Q12837 409 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 OR2G6Q5TZ20 316 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 DTX1Q86Y01 620 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 GPALPP1Q8IXQ4 340 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TM9SF4Q92544 642 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 IP6K3Q96PC2 410 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 PTGES2Q9H7Z7 377 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 ZNF346Q9UL40 294 aaKnown RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 CAB39Q9Y376 341 aaPredicted RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 CORINQ9Y5Q5 1042 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 MYO15AQ9UKN7 3530 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 GFRA3O60609 400 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 SNX4O95219 450 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 IGHMP01871 453 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
CLK3-204ENST00000483723 EIF1P41567 113 aaKnown RBP12.67□□□□□ -0.38
CLK3-204ENST00000483723 VBP1P61758 197 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 NCS1P62166 190 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 LGALS3BPQ08380 585 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ACER2Q5QJU3 275 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 PRAMEF20Q5VT98 475 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 B3GNTL1Q67FW5 361 aaPredicted RBP12.67□□□□□ -0.38
CLK3-204ENST00000483723 IGF2-ASQ6U949 168 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 PHC2Q8IXK0 858 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 KLHL36Q8N4N3 616 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 SCAIQ8N9R8 606 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 OR4K17Q8NGC6 315 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 OR9Q1Q8NGQ5 310 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ZPLD1Q8TCW7 415 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 DYNC2LI1Q8TCX1 351 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ZBTB8AQ96BR9 441 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 SLC25A36Q96CQ1 311 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 DDIT4LQ96D03 193 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 TSPAN32Q96QS1 320 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 OR51E2Q9H255 320 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 FANCFQ9NPI8 374 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 GRHPRQ9UBQ7 328 aa12.67□□□□□ -0.38
CLK3-204ENST00000483723 C12orf71A8MTZ7 269 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 MS4A18H0YCH9 400 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 GYPBP06028 91 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 IMPDH2P12268 514 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 SPI1P17947 270 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 IL11P20809 199 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 CD79BP40259 229 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 CLK1P49759 484 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 RPS7P62081 194 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 GABREP78334 506 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 DBPQ10586 325 aaPredicted RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 ATP1A4Q13733 1029 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 GALEQ14376 348 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 PON3Q15166 354 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.386e-8■□□□□ 8.3
CLK3-204ENST00000483723 MS4A18Q3C1V0 323 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 ZNF227Q86WZ6 799 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 TMEM99Q8N816 258 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 LSM14AQ8ND56 463 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 ZNRF4Q8WWF5 429 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 GATAD2BQ8WXI9 593 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 NDUFB11Q9NX14 153 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 SEC14L4Q9UDX3 406 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 MRPS18BQ9Y676 258 aaKnown RBP12.66□□□□□ -0.38
CLK3-204ENST00000483723 DOCK10Q96BY6 2186 aa12.66□□□□□ -0.38
CLK3-204ENST00000483723 PTPRBP23467 1997 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 FAM47E-STBD1D6RA91 191 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 TRIM3O75382 744 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 GPX5O75715 221 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 GLCEO94923 617 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 LIFP15018 202 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 PEX19P40855 299 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 CRYBB2P43320 205 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms