RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TTC33Q6PID6 262 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-225ENST00000483506 DEF8Q6ZN54 512 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 AAED1Q7RTV5 226 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 P2RY8Q86VZ1 359 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 UBE2J2Q8N2K1 259 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 POMGNT2Q8NAT1 580 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 NINJ1Q92982 152 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 TPD52L3Q96J77 140 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 SLCO5A1Q9H2Y9 848 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 SLC7A10Q9NS82 523 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 NDE1Q9NXR1 346 aa15.87■□□□□ 0.13
HDAC6-225ENST00000483506 OR6C65A6NJZ3 312 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 MS4A18H0YCH9 400 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 TRAF3IP2O43734 574 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-225ENST00000483506 ZNF432O94892 652 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 IGHV3-9P01782 118 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 HSD17B1P14061 328 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 ZNF43P17038 809 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 DNAJA1P31689 397 aaKnown RBP15.86■□□□□ 0.13
HDAC6-225ENST00000483506 TAS2R41P59536 307 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 PIN1Q13526 163 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-225ENST00000483506 ZNF74Q16587 644 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 MS4A18Q3C1V0 323 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 SPATS1Q496A3 300 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 TIMM23BQ5SRD1 257 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 FBXW10Q5XX13 1052 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 NHLRC1Q6VVB1 395 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 VTCN1Q7Z7D3 282 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 KDM8Q8N371 416 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 CCDC197Q8NCU1 140 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 C1orf162Q8NEQ5 155 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-225ENST00000483506 GEMIN6Q8WXD5 167 aaKnown RBP15.86■□□□□ 0.13
HDAC6-225ENST00000483506 NRGNQ92686 78 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 BOD1Q96IK1 185 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 PRRC1Q96M27 445 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 ASPNQ9BXN1 380 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 FKRPQ9H9S5 495 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 ADA2Q9NZK5 511 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 CD300AQ9UGN4 299 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 RIMS3Q9UJD0 308 aa15.86■□□□□ 0.13
HDAC6-225ENST00000483506 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-225ENST00000483506 HPRP00739 348 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 SERPINA1P01009 418 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 PTNP21246 168 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 SELENOPP49908 381 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 MNAT1P51948 309 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 NR1H2P55055 460 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 FAPQ12884 760 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 C1QTNF12Q5T7M4 302 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 PAMR1Q6UXH9 720 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 OR5J2Q8NH18 312 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 PIK3IP1Q96FE7 263 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 MUS81Q96NY9 551 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 LINC00470Q9BZP3 86 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 MEPEQ9NQ76 525 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-225ENST00000483506 UPB1Q9UBR1 384 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 ST6GALNAC2Q9UJ37 374 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 ZNF229Q9UJW7 825 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 A4GNTQ9UNA3 340 aa15.85■□□□□ 0.13
HDAC6-225ENST00000483506 RAI1Q7Z5J4 1906 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-225ENST00000483506 OR5H1A6NKK0 313 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 LRRN3E7EW58 273 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 PLPP3O14495 311 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 ZNF682O95780 498 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 IFNW1P05000 195 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 MPGP29372 298 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 FOXG1P55316 489 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-225ENST00000483506 SLC25A3Q00325 362 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 PUDPQ08623 228 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 GABRA6Q16445 453 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 IFI44LQ53G44 452 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 SAMD4BQ5PRF9 694 aaKnown RBP15.84■□□□□ 0.13
HDAC6-225ENST00000483506 OR7E24Q6IFN5 339 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 C16orf89Q6UX73 402 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 SLC46A3Q7Z3Q1 461 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 ABHD12BQ7Z5M8 362 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-225ENST00000483506 PXKQ7Z7A4 578 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 WFDC8Q8IUA0 241 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 NKAIN4Q8IVV8 208 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 OFCC1Q8IZS5 231 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 C17orf78Q8N4C9 275 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 ANKK1Q8NFD2 765 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 FAM162AQ96A26 154 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 HSH2DQ96JZ2 352 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 HS6ST2Q96MM7 605 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 HS3ST6Q96QI5 342 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 TMEM204Q9BSN7 226 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 LIME1Q9H400 295 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 GORASP2Q9H8Y8 452 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 RPS6KA6Q9UK32 745 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 EDARQ9UNE0 448 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 NOX1Q9Y5S8 564 aa15.84■□□□□ 0.13
HDAC6-225ENST00000483506 ROS1P08922 2347 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 RAD51DO75771 328 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 MT-ND1P03886 318 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 ASAH2BP0C7U1 165 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 NQO1P15559 274 aaKnown RBP15.83■□□□□ 0.12
HDAC6-225ENST00000483506 NCK1P16333 377 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 CBLP22681 906 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 UGT2B15P54855 530 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms