RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZNF749O43361 778 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PRKYO43930 277 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 OR10H2O60403 315 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PRKRAO75569 313 aaKnown RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 ITGA10O75578 1167 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 UPK1BO75841 260 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 SOX14O95416 240 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 NSA2O95478 260 aaKnown RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 DDAH2O95865 285 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PTTG1O95997 202 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 TSPAN19P0C672 248 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PRG2P13727 222 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CDH3P22223 829 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 NR4A1P22736 598 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CD27P26842 260 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 HTR1FP30939 366 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 LCN1P31025 176 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 IDUAP35475 653 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 AVPR1BP47901 424 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 LSM3P62310 102 aaKnown RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 PSPHP78330 225 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 IGLV3-21P80748 117 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 SIM1P81133 766 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 DUSP2Q05923 314 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CDC20Q12834 499 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TPBGQ13641 420 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 SERTAD2Q14140 314 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 FZD2Q14332 565 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TRAM1Q15629 374 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 DUSP5Q16690 384 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PLK5Q496M5 336 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TPRG1LQ5T0D9 272 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 TMPRSS11AQ6ZMR5 421 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 ZNF836Q6ZNA1 936 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 ZNF620Q6ZNG0 422 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PLEKHG7Q6ZR37 379 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TMPRSS11FQ6ZWK6 438 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 GDF7Q7Z4P5 450 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TRIM73Q86UV7 250 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 VRK2Q86Y07 508 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TSTD1Q8NFU3 115 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 OR52N1Q8NH53 320 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CCL4L1Q8NHW4 92 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 GPR151Q8TDV0 419 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 UFD1Q92890 307 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 FGF11Q92914 225 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 ZDHHC12Q96GR4 267 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CEP19Q96LK0 163 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 OPALINQ96PE5 141 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 HOXD1Q9GZZ0 328 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 C6orf106Q9H6K1 298 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 ZBTB20Q9HC78 741 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 SERINC1Q9NRX5 453 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 SEMA4GQ9NTN9 838 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 FBXO34Q9NWN3 711 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 DNAJC27Q9NZQ0 273 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PRODH2Q9UF12 536 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 FBXL17Q9UF56 701 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 DAPK2Q9UIK4 370 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 PLCL2Q9UPR0 1127 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TRAPPC4Q9Y296 219 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 EXOGQ9Y2C4 368 aaKnown RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 MTCH2Q9Y6C9 303 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 KCNE3Q9Y6H6 103 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CLCA3PQ9Y6N3 262 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TRANK1O15050 2925 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CHD9Q3L8U1 2897 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 NINQ8N4C6 2090 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 DOCK9Q9BZ29 2069 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 LRP4O75096 1905 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 LOC105369274A0A096LPK9 316 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 LOC102723532A0A0G2JNH3 316 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 IQCMA0A1B0GVH7 501 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 UNC119BA6NIH7 251 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 SLC9B1P1A6NJY1 282 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CPSF4LA6NMK7 179 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 EFCAB7A8K855 629 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 H0YIG0 161 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 J3QRK9 145 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 SURF4O15260 269 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 FCMRO60667 390 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 HCN1O60741 890 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 PRAMEF2O60811 474 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CSO75390 466 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 IGF2P01344 180 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 APOA1P02647 267 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 STATHP02808 62 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CSF2P04141 144 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 HLA-DPB1P04440 258 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 DRD5P21918 477 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 PAICSP22234 425 aaKnown RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 PTBP1P26599 531 aaKnown RBP eCLIP7.04□□□□□ -1.282e-13■■■■■ 28.1
SNX13-208ENST00000482558 FGF9P31371 208 aaPredicted RBP7.04□□□□□ -1.28
SNX13-208ENST00000482558 GABRA5P31644 462 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 CAPZBP47756 277 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 BCAP31P51572 246 aa7.04□□□□□ -1.28
SNX13-208ENST00000482558 MLLT10P55197 1068 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms