RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 IFNA14P01570 189 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 NQO1P15559 274 aaKnown RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 PTAFRP25105 342 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 SELENOPP49908 381 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 CRYBA2P53672 197 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 FOXG1P55316 489 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ENTPD8Q5MY95 495 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 Q5PR19 223 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 KLHL24Q6TFL4 600 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ARPINQ7Z6K5 226 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 KRTAP1-3Q8IUG1 177 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 KDM8Q8N371 416 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 SCAIQ8N9R8 606 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 KBTBD8Q8NFY9 601 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 LILRB1Q8NHL6 650 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ADAMTS16Q8TE57 1224 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 IGFBPL1Q8WX77 278 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 PROX1Q92786 737 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 RCN3Q96D15 328 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 PERPQ96FX8 193 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 SLC41A3Q96GZ6 507 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ASPNQ9BXN1 380 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 GSX2Q9BZM3 304 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 PCDHAC1Q9H158 963 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 B3GAT1Q9P2W7 334 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 BAG5Q9UL15 447 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 MAGED1Q9Y5V3 778 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 A0A1W2PR80 420 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 TRAPPC13A5PLN9 417 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 FAM220BPB1ANY3 271 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 ABCD4O14678 606 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SLC43A1O75387 559 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 MT-ATP6P00846 226 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 BGLAPP02818 100 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 PAX1P15863 534 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 CDH2P19022 906 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 CBLP22681 906 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF83P51522 516 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 CLDN17P56750 224 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 PRPS1P60891 318 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 IL1RL1Q01638 556 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 PRSS57Q6UWY2 283 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 LINC00114Q6XXX2 140 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SPATA21Q7Z572 469 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 RBM45Q8IUH3 476 aaKnown RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 UEVLDQ8IX04 471 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 C10orf53Q8N6V4 93 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 POU5F2Q8N7G0 328 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 WDR31Q8NA23 367 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 OR2T12Q8NG77 320 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 OR4D11Q8NGI4 311 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 BOD1Q96IK1 185 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 MPP4Q96JB8 637 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF583Q96ND8 569 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 MOGAT1Q96PD6 335 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 ALKBH3Q96Q83 286 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 LINC00470Q9BZP3 86 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 OBP2BQ9NPH6 170 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SLC17A5Q9NRA2 495 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 MRPL39Q9NYK5 338 aaKnown RBP10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SLC7A7Q9UM01 511 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 MGAT4BQ9UQ53 548 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 LAMP3Q9UQV4 416 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 AP3M1Q9Y2T2 418 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SH3GLB1Q9Y371 365 aa10.43□□□□□ -0.74
HMGN1-213ENST00000482192 SHISA9B4DS77 424 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 UPK3AO75631 287 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF432O94892 652 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 WNT11O96014 354 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 COX4I1P13073 169 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 FOSL1P15407 271 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 PTNP21246 168 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 CD40P25942 277 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 PTH2RP49190 550 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 SH3BGRP55822 239 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 RPS4XP62701 263 aaKnown RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 LTBQ06643 244 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 LGALS3BPQ08380 585 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 PMS2P3Q13401 168 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 HIKESHIQ53FT3 197 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 HMBOX1Q6NT76 420 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 TTC33Q6PID6 262 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 PIK3C3Q8NEB9 887 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 OR1K1Q8NGR3 316 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 NEUROG1Q92886 237 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 SLC19A3Q9BZV2 496 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 DLL4Q9NR61 685 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF701Q9NV72 531 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 CISD1Q9NZ45 108 aaKnown RBP10.42□□□□□ -0.74
HMGN1-213ENST00000482192 USP22Q9UPT9 525 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 NOX1Q9Y5S8 564 aa10.42□□□□□ -0.74
HMGN1-213ENST00000482192 F8P00451 2351 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ELOVL7A1L3X0 281 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 MS4A18H0YCH9 400 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms