RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 POLE3Q9NRF9 147 aa12.49□□□□□ -0.41
USP42-206ENST00000479544 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
USP42-206ENST00000479544 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
USP42-206ENST00000479544 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
USP42-206ENST00000479544 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 PYCARD-AS1I3L0S3 204 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 FGF19O95750 216 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 LATS1O95835 1130 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 MPIG6BO95866 241 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CD160O95971 181 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CSF1P09603 554 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CSF2RAP15509 400 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 POU3F2P20265 443 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 GUCA2AQ02747 115 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ALG10Q5BKT4 473 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 RPL22L1Q6P5R6 122 aaKnown RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 ZNF550Q7Z398 422 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 OR13C3Q8NGS6 347 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 OR2L8Q8NGY9 312 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 WFDC6Q9BQY6 131 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CCDC163A0A0D9SF12 145 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 B4DGG1 531 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 GAPDHSO14556 408 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 SURF4O15260 269 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ZNF208O43345 1280 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 TSPAN15O95858 294 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 EGFP01133 1207 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 IGFALSP35858 605 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 OPRD1P41143 372 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 DUSP5Q16690 384 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 GPAT4Q86UL3 456 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ZNF619Q8N2I2 560 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CGGBP1Q9UFW8 167 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 SCML1Q9UN30 329 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 IDSB3KWA1 339 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CLEC3AO75596 197 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 APODP05090 189 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 EPXP11678 715 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ITGB7P26010 798 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 HSD11B1P28845 292 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 HENMT1Q5T8I9 393 aaKnown RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 NIPAL3Q6P499 406 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 NECAB3Q96P71 396 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 FGF20Q9NP95 211 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 OPN1LWP04000 364 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 SERPINA5P05154 406 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 IFNGR1P15260 489 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 CBX5P45973 191 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 METAP1P53582 386 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 WFIKKN2Q8TEU8 576 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
USP42-206ENST00000479544 OR1F2PQ96R84 312 aa12.48□□□□□ -0.41
USP42-206ENST00000479544 GCM2O75603 506 aaPredicted RBP12.47□□□□□ -0.41
USP42-206ENST00000479544 GLI4P10075 376 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 AMY2BP19961 511 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
USP42-206ENST00000479544 POU3F4P49335 361 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 DECR1Q16698 335 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 IGSF11Q5DX21 431 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 RAB11FIP2Q7L804 512 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 TCEAL8Q8IYN2 117 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 OR5T2Q8NGG2 359 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 FAM83CQ9BQN1 747 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 MED18Q9BUE0 208 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 CDC14CA4D256 554 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 OIP5O43482 229 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 MED6O75586 246 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 TRHRP34981 398 aaPredicted RBP12.47□□□□□ -0.41
USP42-206ENST00000479544 GPR143P51810 404 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 HMGA2P52926 109 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 RAB2AP61019 212 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 CSNK1G2P78368 415 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 GSG1Q2KHT4 349 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 LIPNQ5VXI9 398 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 OR7G2Q8NG99 324 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 OR2AJ1Q8NGZ0 328 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 NXF2Q9GZY0 626 aaKnown RBP12.47□□□□□ -0.41
USP42-206ENST00000479544 PELI2Q9HAT8 420 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 ELOVL3Q9HB03 270 aa12.47□□□□□ -0.41
USP42-206ENST00000479544 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
USP42-206ENST00000479544 RDH16O75452 317 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms