RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZNF317Q96PQ6 595 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF300Q96RE9 604 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 PIMREGQ9BSJ6 248 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SF3B5Q9BWJ5 86 aaKnown RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 TAPBPLQ9BX59 468 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF350Q9GZX5 532 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR51I1Q9H343 314 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 CALML5Q9NZT1 146 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 MALT1Q9UDY8 824 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ADAM21Q9UKJ8 722 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 MKLN1Q9UL63 735 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 NUP214P35658 2090 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 C9JVG2 144 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 RAMP1O60894 148 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SKAP2O75563 359 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 UGT2B17O75795 530 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 VAMP5O95183 116 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 CD8AP01732 235 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 GPIP06744 558 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 CHRNGP07510 517 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 PCMT1P22061 227 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 UBE2NP61088 152 aaKnown RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 KCNJ10P78508 379 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SQLEQ14534 574 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 GFOD2Q3B7J2 385 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 FREM1Q5H8C1 2179 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 FAM166AQ6J272 317 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 NUDCD3Q8IVD9 361 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 MIER2Q8N344 545 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR5D16Q8NGK9 328 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 NEUROG1Q92886 237 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ROPN1LQ96C74 230 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 TRIM44Q96DX7 344 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ZBTB18Q99592 522 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SLC25A15Q9Y619 301 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 A0A096LPI6 279 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 E7EQL1 145 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 FAAHO00519 579 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 KIAA0513O60268 411 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 LMX1BO60663 402 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 H6PDO95479 791 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 CPSF4O95639 269 aaKnown RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 KRT75O95678 551 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 SHBGP04278 402 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 G6PDP11413 515 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 IL7RP16871 459 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 CXCR1P25024 350 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 MPGP29372 298 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 S100A3P33764 101 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 RYKP34925 604 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 PGM1P36871 562 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 IDH2P48735 452 aaKnown RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 CD69Q07108 199 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 KRTAP1-1Q07627 177 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 SCGB2A2Q13296 93 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 ADRM1Q16186 407 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 GABRA6Q16445 453 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 NDUFAF6Q330K2 333 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 C3orf36Q3SXR2 165 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM225Q6GV28 225 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 PAQR6Q6TCH4 344 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 RIMKLAQ8IXN7 391 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 PEX5LQ8IYB4 626 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 GLB1L3Q8NCI6 653 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 TCP10LQ8TDR4 215 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 TESCQ96BS2 214 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 ARL5BQ96KC2 179 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 CCDC106Q9BWC9 280 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 RAB1BQ9H0U4 201 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 MTHFD2LQ9H903 347 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 SLC17A5Q9NRA2 495 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 CTPS2Q9NRF8 586 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM45AQ9NWC5 275 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 THUMPD1Q9NXG2 353 aaKnown RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 MARCOQ9UEW3 520 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-214ENST00000477152 KCNE3Q9Y6H6 103 aa6.36□□□□□ -1.39
BRCA1-214ENST00000477152 ROS1P08922 2347 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 IGHV4-30-2A0A087WSY4 118 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TMED7-TICAM2A0A0A6YYA0 188 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF716A6NP11 495 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM233B4DJY2 109 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 PHF1O43189 567 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 AKAP8O43823 692 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 PEX14O75381 377 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 PDE5AO76074 875 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 KNG1P01042 644 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 CRYAAP02489 173 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 DBIP07108 87 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 BPGMP07738 259 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 OR12D1P0DN82 309 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SRD5A1P18405 259 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 GTF2E2P29084 291 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SLC1A3P43003 542 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SH3BGRP55822 239 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 IRX1P78414 480 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 GALEQ14376 348 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 IQCCQ4KMZ1 466 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 AP1ARQ63HQ0 302 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 OR4F3Q6IEY1 312 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms