RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DCAF13Q9NV06 445 aaKnown RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 TAS2R1Q9NYW7 299 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 EMC3Q9P0I2 261 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 TESMINQ9Y4I5 508 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 V9GYQ6 96 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 CRYBG3Q68DQ2 2970 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 FBN2P35556 2912 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 A0A1W2PPR1 153 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 FAM221AA4D161 298 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 GPR171O14626 319 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 PIP5K1CO60331 668 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 MRPL33O75394 65 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 CTAG2O75638 210 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 LYZL6O75951 148 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 DIRAS1O95057 198 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 PRSS23O95084 383 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 CH25HO95992 272 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SEMG1P04279 462 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 IFNW1P05000 195 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 THBDP07204 575 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 PSMB1P20618 241 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 ATP6V1B2P21281 511 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 IGHV1-2P23083 117 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 GTF2E2P29084 291 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SSTR2P30874 369 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 PEX19P40855 299 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 PCYT1AP49585 367 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SELENOPP49908 381 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 VLDLRP98155 873 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 MS4A2Q01362 244 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 POU4F3Q15319 338 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 IQCCQ4KMZ1 466 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SFRP5Q5T4F7 317 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 TSPO2Q5TGU0 170 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 CASP12Q6UXS9 341 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 NHLRC1Q6VVB1 395 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 Q6ZT83 130 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 H1FNTQ75WM6 255 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 AAED1Q7RTV5 226 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SLC46A3Q7Z3Q1 461 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 MEX3DQ86XN8 651 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 C10orf53Q8N6V4 93 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 OR6S1Q8NH40 331 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 FAM81AQ8TBF8 368 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 FAM222BQ8WU58 562 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 NRGNQ92686 78 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM45BQ96B21 275 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 S100PBPQ96BU1 408 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 MPP4Q96JB8 637 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 CLPTM1LQ96KA5 538 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 OXGR1Q96P68 337 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 EPYCQ99645 322 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 POLR2J2Q9GZM3 115 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 ACTR6Q9GZN1 396 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 POLR2J3Q9H1A7 115 aaKnown RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 MCCC2Q9HCC0 563 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 SLC7A10Q9NS82 523 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 NDE1Q9NXR1 346 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-208ENST00000476739 RPS6KA6Q9UK32 745 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 RASD1Q9Y272 281 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 B3GALT5Q9Y2C3 310 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 ALPK2Q86TB3 2170 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
HDAC3-208ENST00000476739 A6NNC1 897 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ANKRD65E5RJM6 399 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 PLPP3O14495 311 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TRAF3IP2O43734 574 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 UPK3AO75631 287 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 VAMP5O95183 116 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 MT-ND1P03886 318 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ITGA5P08648 1049 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 NQO1P15559 274 aaKnown RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 FUT1P19526 365 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 COX5AP20674 150 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 CLDN17P56750 224 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 FAPQ12884 760 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ITGADQ13349 1161 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 PMS2P3Q13401 168 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 DAZAP2Q15038 168 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 C9orf135Q5VTT2 229 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 FBXW9Q5XUX1 488 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 NIPAL3Q6P499 406 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TBPL2Q6SJ96 375 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 CYP2R1Q6VVX0 501 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 LINGO2Q7L985 606 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM200AQ86VY9 491 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 UBE2J2Q8N2K1 259 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM239Q8WW34 195 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 SLC7A6OSQ96CW6 309 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TXNDC15Q96J42 360 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 C7orf34Q96L11 122 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 LURAP1Q96LR2 239 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TSC22D3Q99576 134 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 MED18Q9BUE0 208 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ASPNQ9BXN1 380 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms