RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 HNRNPCL1O60812 293 aaKnown RBP11.37□□□□□ -0.59
MRPL55-228ENST00000476267 CELA3BP08861 270 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 HNRNPCL4P0DMR1 293 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 BMP2P12643 396 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF23P17027 643 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 SRD5A1P18405 259 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 GIFP27352 417 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 SH3BGRP55822 239 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-228ENST00000476267 DSTNP60981 165 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 COPZ1P61923 177 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 MAVSQ7Z434 540 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 KDM8Q8N371 416 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 SLC35B4Q969S0 331 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 ZBTB18Q99592 522 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 C19orf24Q9BVV8 132 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 BPESC1Q9GZL8 116 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF442Q9H7R0 627 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 CHODLQ9H9P2 273 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 BCL2L10Q9HD36 194 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 SDR39U1Q9NRG7 319 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-228ENST00000476267 RCE1Q9Y256 329 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 A0A096LPE4 126 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 A0A1W2PPZ6 126 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 TMEM129A0AVI4 362 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 TRPC5OSA6NMA1 111 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 SLC22A3O75751 556 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 KRT33AO76009 404 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 NUDT7P0C024 238 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 APEHP13798 732 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 IDO1P14902 403 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 CBR1P16152 277 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 CRATP43155 626 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 IDH3GP51553 393 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 ROR2Q01974 943 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 LARS2Q15031 903 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 SLC9B1Q4ZJI4 515 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 COMTD1Q86VU5 262 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 OR4F15Q8NGB8 312 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 TRIM44Q96DX7 344 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 DOK1Q99704 481 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 VRK1Q99986 396 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 MOV10Q9HCE1 1003 aaKnown RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 THAP1Q9NVV9 213 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 ZIM2Q9NZV7 527 aa11.36□□□□□ -0.59
MRPL55-228ENST00000476267 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 V9GYY5 206 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-228ENST00000476267 IGKV1D-42A0A075B6H8 117 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 LOC102725191A0A1B0GVB3 256 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 LILRA1O75019 489 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 AHSA1O95433 338 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 STAMBPO95630 424 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 TACSTD2P09758 323 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 IL2RGP31785 369 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 THBS4P35443 961 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 CLDN17P56750 224 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 ARF1P84077 181 aaKnown RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 HOXC5Q00444 222 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 RGNQ15493 299 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 CEP85LQ5SZL2 805 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 TMEM123Q8N131 208 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 LSMEM1Q8N8F7 131 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 OR9I1Q8NGQ6 314 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 GTF2H4Q92759 462 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 KCNS3Q9BQ31 491 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 PARD6BQ9BYG5 372 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 PAIP1Q9H074 479 aaKnown RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 GPR35Q9HC97 309 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 KCNK9Q9NPC2 374 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 A4GALTQ9NPC4 353 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 THUMPD1Q9NXG2 353 aaKnown RBP11.35□□□□□ -0.59
MRPL55-228ENST00000476267 IFT52Q9Y366 437 aa11.35□□□□□ -0.59
MRPL55-228ENST00000476267 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 HTR2AP28223 471 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 POU3F1Q03052 451 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-228ENST00000476267 CEACAM16Q2WEN9 425 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF311Q5JNZ3 666 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 PHYHD1Q5SRE7 291 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ATG16L1Q676U5 607 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 VHLLQ6RSH7 139 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 NHLRC1Q6VVB1 395 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ZCCHC24Q8N2G6 241 aaKnown RBP11.34□□□□□ -0.59
MRPL55-228ENST00000476267 C10orf111Q8N326 155 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 MAL2Q969L2 176 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 TAAR8Q969N4 342 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ZBTB9Q96C00 473 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 SLC25A36Q96CQ1 311 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms