RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 LINC00114Q6XXX2 140 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 WDR88Q6ZMY6 472 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 WDR31Q8NA23 367 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 POMGNT2Q8NAT1 580 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 KBTBD8Q8NFY9 601 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 SLC26A7Q8TE54 656 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 SETD2Q9BYW2 2564 aaPredicted RBP18.59■□□□□ 0.57
LIME1-204ENST00000476183 LRRN3E7EW58 273 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 SMPD2O60906 423 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 MPGP29372 298 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 SEC24CP53992 1094 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 SLC25A3Q00325 362 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 VEZF1Q14119 521 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 OR7E24Q6IFN5 339 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 NIPAL3Q6P499 406 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 H1FNTQ75WM6 255 aaPredicted RBP18.58■□□□□ 0.56
LIME1-204ENST00000476183 LINGO2Q7L985 606 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 TREML1Q86YW5 311 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 ZNF611Q8N823 705 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 OR6S1Q8NH40 331 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 RP9Q8TA86 221 aaKnown RBP18.58■□□□□ 0.56
LIME1-204ENST00000476183 SLC41A3Q96GZ6 507 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 OXGR1Q96P68 337 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 MOGAT1Q96PD6 335 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 TMEM43Q9BTV4 400 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 CMTM6Q9NX76 183 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 GMPR2Q9P2T1 348 aaKnown RBP18.58■□□□□ 0.56
LIME1-204ENST00000476183 B3GALT5Q9Y2C3 310 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 ZFHX3Q15911 3703 aa18.58■□□□□ 0.56
LIME1-204ENST00000476183 FAM220BPB1ANY3 271 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 MS4A18H0YCH9 400 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 CHP2O43745 196 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 UPK3AO75631 287 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 ZNF432O94892 652 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 HPRP00739 348 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 COX4I1P13073 169 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 CD99P14209 185 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 ZNF43P17038 809 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 TNFRSF1BP20333 461 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 CLDN17P56750 224 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 NKX6-1P78426 367 aaPredicted RBP18.57■□□□□ 0.56
LIME1-204ENST00000476183 MS4A18Q3C1V0 323 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 ERICH5Q6P6B1 374 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 SSX8Q7RTT4 187 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 SPATA21Q7Z572 469 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 C1orf162Q8NEQ5 155 aaPredicted RBP18.57■□□□□ 0.56
LIME1-204ENST00000476183 ADAMTS16Q8TE57 1224 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 EPYCQ99645 322 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 ELAC2Q9BQ52 826 aaKnown RBP18.57■□□□□ 0.56
LIME1-204ENST00000476183 PCDHAC1Q9H158 963 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 SLC17A5Q9NRA2 495 aa18.57■□□□□ 0.56
LIME1-204ENST00000476183 CCDC22O60826 627 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 ZNF83P51522 516 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 ZNF672Q499Z4 452 aaPredicted RBP18.56■□□□□ 0.56
LIME1-204ENST00000476183 LRRC75A-AS1Q8N1F1 130 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 ADPRHL1Q8NDY3 354 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 RASSF5Q8WWW0 418 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 ALKBH3Q96Q83 286 aaPredicted RBP18.56■□□□□ 0.56
LIME1-204ENST00000476183 C1QTNF6Q9BXI9 259 aa18.56■□□□□ 0.56
LIME1-204ENST00000476183 LOC102725191A0A1B0GVB3 256 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 SHISA9B4DS77 424 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 TRAF3IP2O43734 574 aaPredicted RBP18.55■□□□□ 0.56
LIME1-204ENST00000476183 HLA-DOBP13765 273 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 CDH2P19022 906 aaPredicted RBP18.55■□□□□ 0.56
LIME1-204ENST00000476183 TGFBR3Q03167 851 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 MFSD13AQ14CX5 517 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 CARM1Q86X55 608 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 C17orf78Q8N4C9 275 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 OR2T12Q8NG77 320 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 PERPQ96FX8 193 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 DLL4Q9NR61 685 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 SLC7A7Q9UM01 511 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 RCE1Q9Y256 329 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 SH3GLB1Q9Y371 365 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 CORINQ9Y5Q5 1042 aa18.55■□□□□ 0.56
LIME1-204ENST00000476183 HEATR1Q9H583 2144 aaKnown RBP18.55■□□□□ 0.56
LIME1-204ENST00000476183 TRAPPC13A5PLN9 417 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 ZNF587BE7ETH6 402 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 ABCD4O14678 606 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 KRT33AO76009 404 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 SOD3P08294 240 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 DANCRP0C864 163 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 DRD4P21917 467 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 GYS2P54840 703 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 IL1RL1Q01638 556 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 SPOCK1Q08629 439 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 C1DQ13901 141 aaKnown RBP18.54■□□□□ 0.56
LIME1-204ENST00000476183 HIKESHIQ53FT3 197 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 Q5PR19 223 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 NHLRC1Q6VVB1 395 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 SLC15A3Q8IY34 581 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 MICU2Q8IYU8 434 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 C10orf53Q8N6V4 93 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 SCAIQ8N9R8 606 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 PROX1Q92786 737 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 FBXW5Q969U6 566 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 PRSS27Q9BQR3 290 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 ZNF426Q9BUY5 554 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 ASPNQ9BXN1 380 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 LINC00470Q9BZP3 86 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms