RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MED13LQ71F56 2210 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 A0A087WUU8 490 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 A0A1B0GWA3 101 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 BCAS1O75363 584 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 CRHP06850 196 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 TCEA1P23193 301 aaKnown RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 PCYT1AP49585 367 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 RNF144AP50876 292 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 ESRRGP62508 458 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 ADARB1P78563 741 aaKnown RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 PLAURQ03405 335 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 ZNF117Q03924 483 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 FOXD4Q12950 439 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 SNTB1Q13884 538 aaKnown RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 DAZAP2Q15038 168 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 RAET1LQ5VY80 246 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 C1orf94Q6P1W5 598 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 PGBD2Q6P3X8 592 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 TTC33Q6PID6 262 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 CD300LDQ6UXZ3 194 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 MBOAT2Q6ZWT7 520 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 GALNT5Q7Z7M9 940 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 CDH24Q86UP0 819 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 SETD9Q8NE22 299 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 FAM222BQ8WU58 562 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 TMEM239Q8WW34 195 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 TMEM234Q8WY98 164 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 INTS12Q96CB8 462 aaKnown RBP13.99□□□□□ -0.17
CPSF3-203ENST00000475482 PIGQQ9BRB3 760 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 PRR14Q9BWN1 585 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 GABARAPL3Q9BY60 117 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 RIBC2Q9H4K1 309 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 FAM118AQ9NWS6 357 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 MED31Q9Y3C7 131 aa13.99□□□□□ -0.17
CPSF3-203ENST00000475482 A0A087WZY1 265 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 H0YC42 278 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 SLC16A6O15403 523 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 NUDT14O95848 222 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 GASTP01350 101 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 ZNF17P17021 662 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 POU3F2P20265 443 aaPredicted RBP13.98□□□□□ -0.17
CPSF3-203ENST00000475482 HTR3AP46098 478 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 IDH2P48735 452 aaKnown RBP13.98□□□□□ -0.17
CPSF3-203ENST00000475482 CLDN20P56880 219 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 NPRL3Q12980 569 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 KEAP1Q14145 624 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 PDK3Q15120 406 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 SEC23BQ15437 767 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 GGNQ86UU5 652 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 TSPYL5Q86VY4 417 aaPredicted RBP13.98□□□□□ -0.17
CPSF3-203ENST00000475482 KIF18BQ86Y91 864 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 NKAIN4Q8IVV8 208 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 MEIOBQ8N635 442 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
CPSF3-203ENST00000475482 ARSGQ96EG1 525 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 SH3YL1Q96HL8 342 aaPredicted RBP13.98□□□□□ -0.17
CPSF3-203ENST00000475482 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 APOL4Q9BPW4 351 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 SLC19A3Q9BZV2 496 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 PIGMQ9H3S5 423 aa13.98□□□□□ -0.17
CPSF3-203ENST00000475482 LOC100130705A0A1B0GUX0 176 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 A0A1W2PNV4 684 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 ELOA3DA6NLF2 546 aaPredicted RBP13.97□□□□□ -0.17
CPSF3-203ENST00000475482 A8MXE2 369 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 OSMP13725 252 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 MYF6P23409 242 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 SLC1A3P43003 542 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 GUSBP1Q15486 140 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 NDUFAF6Q330K2 333 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 ELOA3BQ3SY89 546 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 CBLN3Q6UW01 205 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 C8orf59Q8N0T1 100 aaPredicted RBP13.97□□□□□ -0.17
CPSF3-203ENST00000475482 GCNT2Q8N0V5 402 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 GTPBP8Q8N3Z3 284 aaPredicted RBP13.97□□□□□ -0.17
CPSF3-203ENST00000475482 ELOA3Q8NG57 546 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 OR5M1Q8NGP8 315 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 TMEM255BQ8WV15 326 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 MBOAT4Q96T53 435 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 NPAS1Q99742 590 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 NIPSNAP1Q9BPW8 284 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 KLHDC3Q9BQ90 382 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 GRIP2Q9C0E4 1043 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 RNF122Q9H9V4 155 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 RASSF1Q9NS23 344 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 ICAM5Q9UMF0 924 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 ZNF175Q9Y473 711 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 HSPE1-MOB4S4R3N1 261 aa13.97□□□□□ -0.17
CPSF3-203ENST00000475482 A0A087WUJ7 227 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 TUBAL3A6NHL2 446 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 SLC22A20A6NK97 555 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 A6NNC1 897 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 EEF1E1-BLOC1S5C9J1V9 151 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 EEF1E1O43324 174 aaKnown RBP13.96□□□□□ -0.17
CPSF3-203ENST00000475482 MITFO75030 526 aaPredicted RBP13.96□□□□□ -0.17
CPSF3-203ENST00000475482 THY1P04216 161 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 EPXP11678 715 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 POU2F1P14859 743 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 FPR3P25089 353 aa13.96□□□□□ -0.17
CPSF3-203ENST00000475482 TSPAN31Q12999 210 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms