RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CORINQ9Y5Q5 1042 aa21.14■□□□□ 0.97
CPNE1-223ENST00000475146 A0A1W2PR80 420 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 ELOVL7A1L3X0 281 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 GMNCA6NCL1 334 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 PDLIM1O00151 329 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 BGLAPP02818 100 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 TNFRSF1BP20333 461 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 MPGP29372 298 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 NUDT2P50583 147 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 TGFBR3Q03167 851 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 BSPH1Q075Z2 132 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 GABRA6Q16445 453 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 ABHD12BQ7Z5M8 362 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-223ENST00000475146 AKAP1Q92667 903 aaKnown RBP eCLIP21.13■□□□□ 0.97
CPNE1-223ENST00000475146 PIGTQ969N2 578 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 ALKBH3Q96Q83 286 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-223ENST00000475146 B3GAT1Q9P2W7 334 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 SLC7A7Q9UM01 511 aa21.13■□□□□ 0.97
CPNE1-223ENST00000475146 PRRC2AP48634 2157 aaKnown RBP21.13■□□□□ 0.97
CPNE1-223ENST00000475146 HS3ST1O14792 307 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 SNX3O60493 162 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 CDH2P19022 906 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-223ENST00000475146 HOXC12P31275 282 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 SLC7A2P52569 658 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 LTBQ06643 244 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 LGALS3BPQ08380 585 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 CYBRD1Q53TN4 286 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 TTC33Q6PID6 262 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-223ENST00000475146 WDR88Q6ZMY6 472 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 DEF8Q6ZN54 512 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 SLC15A3Q8IY34 581 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 ADPRHL1Q8NDY3 354 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 C1orf162Q8NEQ5 155 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-223ENST00000475146 MUS81Q96NY9 551 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 MOGAT1Q96PD6 335 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 PCDHAC1Q9H158 963 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 MYLK2Q9H1R3 596 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 NPAP1Q9NZP6 1156 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 GMPR2Q9P2T1 348 aaKnown RBP21.12■□□□□ 0.97
CPNE1-223ENST00000475146 F8P00451 2351 aa21.12■□□□□ 0.97
CPNE1-223ENST00000475146 DPRXA6NFQ7 191 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 OR6C65A6NJZ3 312 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 ZNF587BE7ETH6 402 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 LRRN3E7EW58 273 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 AKAP8O43823 692 aaKnown RBP21.11■□□□□ 0.97
CPNE1-223ENST00000475146 THY1P04216 161 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 KDELR2P33947 212 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 LIPEQ05469 1076 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 PMS2P3Q13401 168 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 TSPYL5Q86VY4 417 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-223ENST00000475146 UEVLDQ8IX04 471 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 SCAIQ8N9R8 606 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 CMTM5Q96DZ9 223 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 TPD52L3Q96J77 140 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 HOPXQ9BPY8 73 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-223ENST00000475146 AMBRA1Q9C0C7 1298 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 RCE1Q9Y256 329 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 SLC25A15Q9Y619 301 aa21.11■□□□□ 0.97
CPNE1-223ENST00000475146 RAI1Q7Z5J4 1906 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-223ENST00000475146 KPNA4O00629 521 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-223ENST00000475146 SHOX2O60902 331 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-223ENST00000475146 SMPD2O60906 423 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 LYPD3O95274 346 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 ZNF83P51522 516 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 TAS2R41P59536 307 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 ADAM5Q6NVV9 412 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 KLHL24Q6TFL4 600 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 LINC00114Q6XXX2 140 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 C17orf78Q8N4C9 275 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 KBTBD8Q8NFY9 601 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 SLC41A3Q96GZ6 507 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 MPP4Q96JB8 637 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 PIP5K1AQ99755 562 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 MRPL39Q9NYK5 338 aaKnown RBP21.1■□□□□ 0.97
CPNE1-223ENST00000475146 AKAP9Q99996 3911 aa21.1■□□□□ 0.97
CPNE1-223ENST00000475146 ROS1P08922 2347 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 NME4O00746 187 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 GSTA4O15217 222 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 SLC43A1O75387 559 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 UPK3AO75631 287 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 HPRP00739 348 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 MT-ATP6P00846 226 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 OR1E2P47887 323 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 KLHL17Q6TDP4 642 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 HACD2Q6Y1H2 254 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 ZNF611Q8N823 705 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 SLC17A5Q9NRA2 495 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 AMDHD2Q9Y303 409 aa21.09■□□□□ 0.97
CPNE1-223ENST00000475146 LOC102725191A0A1B0GVB3 256 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 M0R1B8 84 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 TRAF3IP2O43734 574 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-223ENST00000475146 DSCAMO60469 2012 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 CH25HO95992 272 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 PRDX6P30041 224 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 POU3F1Q03052 451 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-223ENST00000475146 PUDPQ08623 228 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 HMBOX1Q6NT76 420 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 TGIF2LYQ8IUE0 185 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 WDR31Q8NA23 367 aa21.08■□□□□ 0.97
CPNE1-223ENST00000475146 NEUROG1Q92886 237 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms