RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 C8BP07358 591 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 GTF2E2P29084 291 aaKnown RBP13.35□□□□□ -0.27
VARS-223ENST00000474643 PSME3P61289 254 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 LIPEQ05469 1076 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 ETFDHQ16134 617 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 DUSP7Q16829 419 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 CLEC12BQ2HXU8 276 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 ALG10BQ5I7T1 473 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 FBXW9Q5XUX1 488 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 SLC22A25Q6T423 547 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 CCDC80Q76M96 950 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 COMTD1Q86VU5 262 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 SLC15A3Q8IY34 581 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 RBM15BQ8NDT2 890 aaKnown RBP13.35□□□□□ -0.27
VARS-223ENST00000474643 OR52N5Q8NH56 324 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 DNAJA4Q8WW22 397 aaPredicted RBP13.35□□□□□ -0.27
VARS-223ENST00000474643 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 MCHR1Q99705 422 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 MMADHCQ9H3L0 296 aaPredicted RBP13.35□□□□□ -0.27
VARS-223ENST00000474643 ZNF701Q9NV72 531 aaPredicted RBP13.35□□□□□ -0.27
VARS-223ENST00000474643 PARPBPQ9NWS1 579 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 TAS2R1Q9NYW7 299 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 ADA2Q9NZK5 511 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 BAG5Q9UL15 447 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 TRAPPC4Q9Y296 219 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 SLC9A8Q9Y2E8 581 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 A0A1B0GWA3 101 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 ZC3H12DA2A288 527 aaKnown RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 OR5H1A6NKK0 313 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 ABCD4O14678 606 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 KRT33AO76009 404 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 AHSA1O95433 338 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 LGI1O95970 557 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 GPIP06744 558 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 PNMTP11086 282 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 COX5AP20674 150 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 IGHV1-2P23083 117 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 HTR2AP28223 471 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 CDKN1AP38936 164 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 PDK3Q15120 406 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 OR1Q1Q15612 314 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 OR7A5Q15622 319 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 SAMD4BQ5PRF9 694 aaKnown RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 ULK3Q6PHR2 472 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 ATG4DQ86TL0 474 aaPredicted RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 GPR32P1Q8NGA4 272 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 SLC7A6OSQ96CW6 309 aaPredicted RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 SLC47A1Q96FL8 570 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 RADILQ96JH8 1075 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 ARHGDIGQ99819 225 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 KCTD14Q9BQ13 255 aaPredicted RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 BTBD10Q9BSF8 475 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 ADPRHL2Q9NX46 363 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 TAS2R16Q9NYV7 291 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 MGAT4BQ9UQ53 548 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
VARS-223ENST00000474643 MAGED1Q9Y5V3 778 aaPredicted RBP13.34□□□□□ -0.27
VARS-223ENST00000474643 ROS1P08922 2347 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 IGKV3D-15A0A087WSY6 115 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 CPSF4LA6NMK7 179 aaKnown RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 M0R1B8 84 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 NME4O00746 187 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 GMNNO75496 209 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 HSD17B1P14061 328 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 PAX1P15863 534 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 CD247P20963 164 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 KDELR2P33947 212 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 ZNF83P51522 516 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 C1orf140Q5VVS0 124 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 AGAP6Q5VW22 663 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 OR7E24Q6IFN5 339 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 ZNF433Q8N7K0 673 aaPredicted RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 LSMEM1Q8N8F7 131 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 STK35Q8TDR2 534 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 LZICQ8WZA0 190 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.28
VARS-223ENST00000474643 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 BARX1Q9HBU1 254 aaPredicted RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 ING1Q9UK53 422 aaPredicted RBP13.33□□□□□ -0.28
VARS-223ENST00000474643 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 CXCR6O00574 342 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 GYG2O15488 501 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 SOD3P08294 240 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 IMPDH2P12268 514 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 PTAFRP25105 342 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 RPS5P46782 204 aaKnown RBP13.32□□□□□ -0.28
VARS-223ENST00000474643 GSK3BP49841 420 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 FXNQ16595 210 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 NRF1Q16656 503 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms