RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DEFA1P59665 94 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 DEFA3P59666 94 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 INSL4Q14641 139 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 SGCBQ16585 318 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ZMAT1Q5H9K5 638 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 HBMQ6B0K9 141 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 MZT2AQ6P582 158 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 RPL22L1Q6P5R6 122 aaKnown RBP8.9□□□□□ -0.98
USP39-214ENST00000474572 SLC23A3Q6PIS1 610 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 PAPD4Q6PIY7 484 aaKnown RBP8.9□□□□□ -0.98
USP39-214ENST00000474572 ARL9Q6T311 187 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 UNQ9370/PRO34162Q6UXP9 181 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 SHISA6Q6ZSJ9 500 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 SLC16A9Q7RTY1 509 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 NR2C2APQ86WQ0 139 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 PPP1R3BQ86XI6 285 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ADGRG3Q86Y34 549 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 TIGD4Q8IY51 512 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 CADM3Q8N126 398 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ABHD4Q8TB40 342 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 HAVCR2Q8TDQ0 301 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 SNRNP27Q8WVK2 155 aaKnown RBP8.9□□□□□ -0.98
USP39-214ENST00000474572 ST8SIA1Q92185 356 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 TTC9Q92623 222 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
USP39-214ENST00000474572 MNTQ99583 582 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 TTYH2Q9BSA4 534 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ALG12Q9BV10 488 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 ZCCHC4Q9H5U6 513 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 PPP1R3EQ9H7J1 279 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 WDR54Q9H977 334 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 TAS2R5Q9NYW4 299 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 NCDNQ9UBB6 729 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 PCDHGB2Q9Y5G2 931 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 B3GALT1Q9Y5Z6 326 aa8.9□□□□□ -0.98
USP39-214ENST00000474572 LOC102723996A0A087X1L8 192 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 IGLV3-32A0A0A0MS00 114 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 TMED7-TICAM2A0A0A6YYA0 188 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 FABP12A6NFH5 140 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 HSPB2A8KAH6 182 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 A8MVM7 634 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 B4DXG7 233 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 D6RAR5 112 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 FTCDNL1E5RQL4 147 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 BLOC1S5-TXNDC5H3BN57 136 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SCO2O43819 266 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GPRIN2O60269 458 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SUSD5O60279 629 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SELENOFO60613 162 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GATBO75879 557 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 SERPINA3P01011 423 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 HNRNPCP07910 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP39-214ENST00000474572 ATXN8OSP0DMR3 200 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SPNP16150 400 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 THBS2P35442 1172 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 NAA10P41227 235 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 RANBP1P43487 201 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 HTR3AP46098 478 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 RPS5P46782 204 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 EVX1P49640 407 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GDI2P50395 445 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 DUSP3P51452 185 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 GBX2P52951 348 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 FOXL2P58012 376 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 ZFP36L1Q07352 338 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 C17orf67Q0P5P2 114 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 MRPL28Q13084 256 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 IL11RAQ14626 422 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 HSPB2Q16082 182 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 BAK1Q16611 211 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 TP53I3Q53FA7 332 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SLC25A53Q5H9E4 307 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 FAM69AQ5T7M9 428 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 EEF1A1P5Q5VTE0 462 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 PAMR1Q6UXH9 720 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GDPD3Q7L5L3 318 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 MAMDC2Q7Z304 686 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 CPEB2Q7Z5Q1 589 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 JAZF1Q86VZ6 243 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 C1orf210Q8IVY1 113 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 ZNF519Q8TB69 540 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 SMAP2Q8WU79 429 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 METTL21AQ8WXB1 218 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 PHYHIPQ92561 330 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GFM1Q96RP9 751 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP39-214ENST00000474572 PPIL3Q9H2H8 161 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 RERGLQ9H628 205 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 APMAPQ9HDC9 416 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 OCIAD1Q9NX40 245 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 C19orf25Q9UFG5 118 aaPredicted RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 FBXO4Q9UKT5 387 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 ZNF346Q9UL40 294 aaKnown RBP8.89□□□□□ -0.99
USP39-214ENST00000474572 TMED7Q9Y3B3 224 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 GRIP1Q9Y3R0 1128 aa8.89□□□□□ -0.99
USP39-214ENST00000474572 PCNX3Q9H6A9 2034 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 TRBV11-1A0A0K0K1C0 115 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms