RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SLC22A31A6NKX4 558 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 J3QLW9 94 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 DLGAP3O95886 979 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 HIST1H2ABP04908 130 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CD14P08571 375 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF19P17023 458 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SPI1P17947 270 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 IDUAP35475 653 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CAV3P56539 151 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF85Q03923 595 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TP53I3Q53FA7 332 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CDCP2Q5VXM1 449 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF322Q6U7Q0 402 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 HIST3H2AQ7L7L0 130 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 FAM122BQ7Z309 247 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 NUP54Q7Z3B4 507 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 MDGA2Q7Z553 956 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 KLHL36Q8N4N3 616 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 OR8K3Q8NH51 312 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF417Q8TAU3 575 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 HIST1H2ACQ93077 130 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C1GALT1C1Q96EU7 318 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 JSRP1Q96MG2 331 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 TAAR9Q96RI9 348 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 UBL7Q96S82 380 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF587Q96SQ5 575 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 DDOQ99489 341 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ARHGAP9Q9BRR9 750 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 HDHD5Q9BXW7 423 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C6orf62Q9GZU0 229 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 NCDNQ9UBB6 729 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZMIZ1Q9ULJ6 1067 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SLC6A5Q9Y345 797 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 WIF1Q9Y5W5 379 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CHCHD2Q9Y6H1 151 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 FAM186AA6NE01 2351 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 A0A0G2JMM0 328 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PPB8 328 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PRS3 328 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 KIR3DP1A8MWS1 328 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ARHGEF9O43307 516 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 NPIPB7O75200 414 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TFPIP10646 304 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CPEP16870 476 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 KLK2P20151 261 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 PSMA1P25786 263 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 SHC1P29353 583 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 RAB15P59190 212 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 PRPS1P60891 318 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 E2F1Q01094 437 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 FABP5Q01469 135 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 MADCAM1Q13477 382 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 OR7A5Q15622 319 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TRIP6Q15654 476 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 NTRK2Q16620 822 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 DGUOKQ16854 277 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CRTC2Q53ET0 693 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 RNLSQ5VYX0 342 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 VASNQ6EMK4 673 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 RPS19BP1Q86WX3 136 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 WDSUB1Q8N9V3 476 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 PSD4Q8NDX1 1056 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 MCFD2Q8NI22 146 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 POC1BQ8TC44 478 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 OIT3Q8WWZ8 545 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ASB15Q8WXK1 588 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 GNRHR2Q96P88 292 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 KCNS3Q9BQ31 491 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CDADC1Q9BWV3 514 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ASPNQ9BXN1 380 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SYT4Q9H2B2 425 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SNTG1Q9NSN8 517 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ING1Q9UK53 422 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 COPS3Q9UNS2 423 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 BAIAP2Q9UQB8 552 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 FARSAQ9Y285 508 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 hCG_2014768A0A024R1R8 64 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 A0A087WV48 116 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PNR3 127 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 CD8B2A6NJW9 211 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 A8MVM7 634 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 PRR32B1ATL7 298 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ARPC3O15145 178 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 RNF13O43567 381 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 TNFSF15O95150 251 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 AHSA1O95433 338 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 CD8BP10966 210 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 BMP4P12644 408 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 RPS19P39019 145 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 TMED10P49755 219 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 RUNX1T1Q06455 604 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 DYNC1I2Q13409 638 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 SNTA1Q13424 505 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 DCTN2Q13561 401 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 KRR1Q13601 381 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 TMEM44Q2T9K0 475 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 USP43Q70EL4 1123 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 NDUFAF7Q7L592 441 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 JAZF1Q86VZ6 243 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 PM20D2Q8IYS1 436 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms