RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 AK4P27144 223 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 TAS2R19P59542 299 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 LTBQ06643 244 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 EGR3Q06889 387 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 BTN1A1Q13410 526 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF345Q14585 488 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PCGF3Q3KNV8 242 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 LINC00303Q3SY05 128 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 FHL5Q5TD97 284 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 RPTNQ6XPR3 784 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SLC39A5Q6ZMH5 540 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 NUP54Q7Z3B4 507 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MCATQ8IVS2 390 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 DND1Q8IYX4 353 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 MRPL43Q8N983 215 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF454Q8N9F8 522 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 CYB561A3Q8NBI2 242 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PXT1Q8NFP0 134 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR4E2Q8NGC2 313 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR10Z1Q8NGY1 313 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SMIM10Q96HG1 83 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SEC22CQ9BRL7 303 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MFFQ9GZY8 342 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 FXYD6Q9H0Q3 95 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SRMSQ9H3Y6 488 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 BEX1Q9HBH7 125 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MCCC2Q9HCC0 563 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PLCL2Q9UPR0 1127 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MRPS33Q9Y291 106 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 IER3IP1Q9Y5U9 82 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MYO10Q9HD67 2058 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TET1Q8NFU7 2136 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 LRRK1Q38SD2 2015 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 FAM221BA6H8Z2 402 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 LRRC72A6NJI9 287 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 MPTX1A8MV57 137 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 DVL2O14641 736 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ABCD4O14678 606 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 PPM1DO15297 605 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ARPC5O15511 151 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TNFSF14O43557 240 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SCO1O75880 301 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SCGNO76038 276 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 RENP00797 406 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SYPP08247 313 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ADRB1P08588 477 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SPI1P17947 270 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 CDK2P24941 298 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 GABRA3P34903 492 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 PRSS3P35030 304 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 RPS11P62280 158 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERC4-209ENST00000473533 FCRL6Q6DN72 434 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 STAC2Q6ZMT1 411 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 IZUMO1Q8IYV9 350 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 C7orf57Q8NEG2 295 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SDR9C7Q8NEX9 313 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR4D9Q8NGE8 314 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR4K13Q8NH42 304 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 GRHL3Q8TE85 626 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 MYLIPQ8WY64 445 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SLC25A38Q96DW6 304 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TM4SF19Q96DZ7 209 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 PEX11GQ96HA9 241 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR2M4Q96R27 311 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 PIGMQ9H3S5 423 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 APMAPQ9HDC9 416 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 KCMF1Q9P0J7 381 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 CKLFQ9UBR5 152 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 MYO15AQ9UKN7 3530 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TRBV5-5A0A0J9YX44 114 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 MEGF11A6BM72 1044 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 G3V3Q6 166 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 EIF1AYO14602 144 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR10H2O60403 315 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF254O75437 659 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SLC35E2P0CK97 266 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 HIST1H1CP16403 213 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 NAA10P41227 235 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 EIF1AXP47813 144 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 BIKQ13323 160 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 MEF2DQ14814 521 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZNF169Q14929 603 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 CST6Q15828 149 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ANKRD16Q6P6B7 361 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 TMEM205Q6UW68 189 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ZBTB44Q8NCP5 570 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 CLRN3Q8NCR9 226 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 OR6K6Q8NGW6 343 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 SP7Q8TDD2 431 aaPredicted RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 ASB17Q8WXJ9 295 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ASB12Q8WXK4 309 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 PIGKQ92643 395 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 NXPE3Q969Y0 559 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 ADAD1Q96M93 576 aaKnown RBP5.61□□□□□ -1.51
HERC4-209ENST00000473533 KLHL15Q96M94 604 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 LINC00052Q96N35 136 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 CDC6Q99741 560 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 NMNAT2Q9BZQ4 307 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 EXO5Q9H790 373 aa5.61□□□□□ -1.51
HERC4-209ENST00000473533 Q9N2J8 555 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms