RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 VSIG10L2P0DP72 767 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 SOX2P48431 317 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 GXYLT1Q4G148 440 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 B3GNTL1Q67FW5 361 aaPredicted RBP13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 VITQ6UXI7 678 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 C15orf40Q8WUR7 153 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 MIB2Q96AX9 1013 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF426Q9BUY5 554 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 MRI1Q9BV20 369 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 FKRPQ9H9S5 495 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 HEBP2Q9Y5Z4 205 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 TRBV23OR9-2A0A075B6M9 112 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 ANXA2P2A6NMY6 339 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 CT62P0C5K7 136 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 SMIM10L1P0DMW3 83 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF35P13682 527 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 GK2Q14410 553 aaPredicted RBP13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 STAC2Q6ZMT1 411 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 ZPLD1Q8TCW7 415 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 PNPLA2Q96AD5 504 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 SMIM10Q96HG1 83 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 MKKSQ9NPJ1 570 aaPredicted RBP13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 GLS2Q9UI32 602 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 SLC17A4Q9Y2C5 497 aa13.04□□□□□ -0.32
NHLRC3-204ENST00000473371 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 OR6C68A6NDL8 312 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 A8MXK9 166 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TOR1AO14656 332 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 KCNJ13O60928 360 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TMIGD3P0DMS9 266 aaPredicted RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GABRA1P14867 456 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF10P21506 573 aaPredicted RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ITGB8P26012 769 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ITPKBP27987 946 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ACAA2P42765 397 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF273Q14593 569 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GSG1LQ6UXU4 331 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 NPEPL1Q8NDH3 523 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 THAP10Q9P2Z0 257 aaPredicted RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 OPN4Q9UHM6 478 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 A0A087WV48 116 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PRR19A6NJB7 356 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 CTSVO60911 334 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 RBBP9O75884 186 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 IL32P24001 234 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PCGF3Q3KNV8 242 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 RTL10Q7L3V2 364 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GLB1L2Q8IW92 636 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 DND1Q8IYX4 353 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 NSMAFQ92636 917 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 RASD2Q96D21 266 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 OR2A5Q96R48 311 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 SPACA6W5XKT8 324 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 F5H5P2 479 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GOSR2O14653 212 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TMEM127O75204 238 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 LDOC1O95751 146 aaPredicted RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GPR75O95800 540 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 MECP2P51608 486 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 UBE2MP61081 183 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ERVK-25P63136 954 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 IL10RAQ13651 578 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ZMYND11Q15326 602 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PRICKLE4Q2TBC4 344 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 SLC35D3Q5M8T2 416 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PSRC1Q6PGN9 363 aaPredicted RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 KIRREL2Q6UWL6 708 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 PMM1Q92871 262 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 TM4SF19Q96DZ7 209 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 MRPS2Q9Y399 296 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 ETV7Q9Y603 341 aa13.03□□□□□ -0.32
NHLRC3-204ENST00000473371 GLSO94925 669 aaPredicted RBP13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 EML2O95834 649 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 OR8G3PP0DMU2 310 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 CTNNB1P35222 781 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 H2BFSP57053 126 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 PDGFRLQ15198 375 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 ULK3Q6PHR2 472 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 ABHD13Q7L211 337 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 FAM220AQ7Z4H9 259 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 NAXDQ8IW45 347 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 STPG2Q8N412 459 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 BVESQ8NE79 360 aa13.02□□□□□ -0.32
NHLRC3-204ENST00000473371 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms