RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CRYAAP02489 173 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 IFNGR1P15260 489 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 NPR2P20594 1047 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 IL12AP29459 219 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 SLC1A3P43003 542 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ARFIP2P53365 341 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 IL1RL1Q01638 556 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ROR2Q01974 943 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 EGR4Q05215 589 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 SPANXN4Q5MJ08 99 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 C1QTNF12Q5T7M4 302 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 KRT80Q6KB66 452 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 NIPAL3Q6P499 406 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 PIGWQ7Z7B1 504 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 PEG10Q86TG7 708 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 MDP1Q86V88 176 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 COMTD1Q86VU5 262 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 VRK2Q86Y07 508 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 LRRC34Q8IZ02 419 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 POMGNT2Q8NAT1 580 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 OR8J2Q8NGG1 315 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 MAGEE2Q8TD90 523 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 NEURL3Q96EH8 262 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 PAIP2Q9BPZ3 127 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 NAA11Q9BSU3 229 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 SF3B5Q9BWJ5 86 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 C1QTNF5Q9BXJ0 243 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ATAD3AQ9NVI7 634 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 TMEM45AQ9NWC5 275 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 PARPBPQ9NWS1 579 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 HIF1ANQ9NWT6 349 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ADPRHL2Q9NX46 363 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 B3GNT2Q9NY97 397 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 HAO1Q9UJM8 370 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 SPIN1Q9Y657 262 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 WDR91A4D1P6 747 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 OR6C65A6NJZ3 312 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 DUXAA6NLW8 204 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 FAAHO00519 579 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 EIF1BO60739 113 aaKnown RBP8.26□□□□□ -1.09
MCF2L-223ENST00000473345 RP2O75695 350 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 TGDSO95455 350 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CHEK2O96017 543 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 SERPINE1P05121 402 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CBR1P16152 277 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 BGNP21810 368 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 UQCRC2P22695 453 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 MAPK1P28482 360 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 SERPINB5P36952 375 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 RPL3P39023 403 aaKnown RBP8.26□□□□□ -1.09
MCF2L-223ENST00000473345 ALDH3B1P43353 468 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 MVDP53602 400 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 HILS1P60008 231 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 HOXC5Q00444 222 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 EMX2Q04743 252 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 BST1Q10588 318 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 STX3Q13277 289 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CHI3L2Q15782 390 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 GPAT3Q53EU6 434 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 AWAT1Q58HT5 328 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 ATG16L1Q676U5 607 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CGB2Q6NT52 195 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 BHLHB9Q6PI77 547 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 KLHL24Q6TFL4 600 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 NHLRC1Q6VVB1 395 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF836Q6ZNA1 936 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CLIP4Q8N3C7 705 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 ZDHHC22Q8N966 263 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 FGFBP3Q8TAT2 258 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 LRRC8CQ8TDW0 803 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 WDR60Q8WVS4 1066 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-223ENST00000473345 OIT3Q8WWZ8 545 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 GTF3AQ92664 365 aaKnown RBP8.26□□□□□ -1.09
MCF2L-223ENST00000473345 TMEM186Q96B77 213 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 TUBGCP3Q96CW5 907 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 DDIT4LQ96D03 193 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 C7orf26Q96N11 449 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CCT8L2Q96SF2 557 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 SLC35A5Q9BS91 424 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 RAB1BQ9H0U4 201 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 AKTIPQ9H8T0 292 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 SLCO1B3Q9NPD5 702 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 OBP2BQ9NPH6 170 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 G6PC2Q9NQR9 355 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 POLE3Q9NRF9 147 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 EXD2Q9NVH0 621 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 THAP1Q9NVV9 213 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 ASIC5Q9NY37 505 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 FZR1Q9UM11 496 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
MCF2L-223ENST00000473345 CFAP73A6NFT4 308 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF587BE7ETH6 402 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 RPL36A-HNRNPH2H7BZ11 118 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 TMPRSS2O15393 492 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms