RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ENTPD2Q9Y5L3 495 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 A0A1W2PPL8 197 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 ZNF749O43361 778 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 KLF8O95600 359 aaPredicted RBP19.32■□□□□ 0.68
COL18A1-207ENST00000473212 NTSR1P30989 418 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 DIO1P49895 249 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 ALG11Q2TAA5 492 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 CTHRC1Q96CG8 243 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 SPACA7Q96KW9 195 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 TRIM2Q9C040 744 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 NOX3Q9HBY0 568 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 CA10Q9NS85 328 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 POMT2Q9UKY4 750 aa19.32■□□□□ 0.68
COL18A1-207ENST00000473212 ARID1BQ8NFD5 2236 aaPredicted RBP19.32■□□□□ 0.68
COL18A1-207ENST00000473212 A0A1B0GUH1 482 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 H3BSH0 61 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 GALR3O60755 368 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-207ENST00000473212 NANOS3P60323 173 aaKnown RBP19.31■□□□□ 0.68
COL18A1-207ENST00000473212 OPCMLQ14982 345 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 FCAMRQ8WWV6 532 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 EGFP01133 1207 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 PBX2P40425 430 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 PTH2RP49190 550 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 LGALS3BPQ08380 585 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 CSNK1A1LQ8N752 337 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 FAM71CQ8NEG0 241 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 SYNPRQ8TBG9 265 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 ZNF69Q9UC07 566 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 SPACA6W5XKT8 324 aa19.31■□□□□ 0.68
COL18A1-207ENST00000473212 OR6C68A6NDL8 312 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PDCD5O14737 125 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 NKX2-2O95096 273 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 CD1AP06126 327 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PGDP52209 483 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 AP3S2P59780 193 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 RPS15P62841 145 aaKnown RBP19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PXDC1Q5TGL8 231 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 CDH24Q86UP0 819 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 NPEPL1Q8NDH3 523 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 RGP1Q92546 391 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-207ENST00000473212 TSSK2Q96PF2 358 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 LMF1Q96S06 567 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PRDM9Q9NQV7 894 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 HRASLS2Q9NWW9 162 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PIPOXQ9P0Z9 390 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 HCN3Q9P1Z3 774 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 NAP1L6A6NFF2 107 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 GPRIN2O60269 458 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 OR10H2O60403 315 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 ZFPL1O95159 310 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 SPI1P17947 270 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 ANXA7P20073 488 aaKnown RBP19.3■□□□□ 0.68
COL18A1-207ENST00000473212 S1PR1P21453 382 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 STX4Q12846 297 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 LINC00303Q3SY05 128 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 ELFN2Q5R3F8 820 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 LINC00114Q6XXX2 140 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 GATSQ8NAP1 163 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 UXS1Q8NBZ7 420 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 C1orf216Q8TAB5 229 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 FAM131CQ96AQ9 280 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 SGTBQ96EQ0 304 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 DNAJA3Q96EY1 480 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 WDR89Q96FK6 387 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-207ENST00000473212 SIPA1Q96FS4 1042 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 TSPAN10Q9H1Z9 355 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-207ENST00000473212 POLE3Q9NRF9 147 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 RDH8Q9NYR8 311 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 LRIT1Q9P2V4 623 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 PCOLCE2Q9UKZ9 415 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 FOXJ3Q9UPW0 622 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 ZNF281Q9Y2X9 895 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 FKBP7Q9Y680 259 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 V9GY05 133 aa19.3■□□□□ 0.68
COL18A1-207ENST00000473212 CXCL2P19875 107 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 DCTDP32321 178 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 TMEM69Q5SWH9 247 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 NPSR1Q6W5P4 371 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 GLDNQ6ZMI3 551 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 NUDT18Q6ZVK8 323 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 BAHD1Q8TBE0 780 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 PMM1Q92871 262 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 S100A16Q96FQ6 103 aaKnown RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 SFXN2Q96NB2 322 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 OR5V1Q9UGF6 321 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 P2RX1P51575 399 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 EPHA4P54764 986 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 ERVK-25P63136 954 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 MAT1AQ00266 395 aaKnown RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 C9orf50Q5SZB4 431 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 ULK3Q6PHR2 472 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 KIAA1324Q6UXG2 1013 aaKnown RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 GRAMD2AQ8IUY3 354 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 OR6V1Q8N148 313 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 SLC43A2Q8N370 569 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 MEIOBQ8N635 442 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 LSMEM1Q8N8F7 131 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 GALNT11Q8NCW6 608 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 PHOSPHO2Q8TCD6 241 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms