RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TRAM2Q15035 370 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MS4A18Q3C1V0 323 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MTX3Q5HYI7 312 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 SFRP5Q5T4F7 317 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 AAED1Q7RTV5 226 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 OR5J2Q8NH18 312 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 C7orf34Q96L11 122 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 WFIKKN1Q96NZ8 548 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 ZNF385AQ96PM9 386 aaKnown RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 ANKRD19PQ9H560 264 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MCCC2Q9HCC0 563 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MEPEQ9NQ76 525 aaPredicted RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 NANSQ9NR45 359 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 B3GAT1Q9P2W7 334 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 SEC14L4Q9UDX3 406 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MALT1Q9UDY8 824 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 ZNF229Q9UJW7 825 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 MED31Q9Y3C7 131 aa13.52□□□□□ -0.25
SDC3-203ENST00000471567 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
SDC3-203ENST00000471567 CELSR2Q9HCU4 2923 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 CACNA1DQ01668 2161 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 FAM221AA4D161 298 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 OR6C65A6NJZ3 312 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 J3KTA2 159 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 KPNA4O00629 521 aaPredicted RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 PLPP3O14495 311 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 CASKO14936 926 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 PRSS23O95084 383 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 HIST1H2ABP04908 130 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 ITGA2P17301 1181 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 RHCEP18577 417 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 COX5AP20674 150 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 UGT2B15P54855 530 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 PUDPQ08623 228 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 ZP4Q12836 540 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 TRIM25Q14258 630 aaKnown RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 DNAL1Q4LDG9 190 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 HIST3H2AQ7L7L0 130 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 TSEN54Q7Z6J9 526 aaKnown RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 UBE2J2Q8N2K1 259 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 KDM8Q8N371 416 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 POMGNT2Q8NAT1 580 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 PIK3C3Q8NEB9 887 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 LIPHQ8WWY8 451 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 HIST1H2ACQ93077 130 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 KISS1RQ969F8 398 aaPredicted RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 POP5Q969H6 163 aaKnown RBP13.51□□□□□ -0.25
SDC3-203ENST00000471567 SGTBQ96EQ0 304 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 MED18Q9BUE0 208 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 ASB6Q9NWX5 421 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 ZNF226Q9NYT6 803 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 NDUFAF4Q9P032 175 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 RCE1Q9Y256 329 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 NOX1Q9Y5S8 564 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
SDC3-203ENST00000471567 A6NNC1 897 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 ENO4A6NNW6 628 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 GYG2O15488 501 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 AKAP8O43823 692 aaKnown RBP13.5□□□□□ -0.25
SDC3-203ENST00000471567 OR6A2O95222 327 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 SEMG1P04279 462 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 ASAH2BP0C7U1 165 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 IGHV1-2P23083 117 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 IL32P24001 234 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 BNIP1Q12981 228 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.5□□□□□ -0.25
SDC3-203ENST00000471567 SLC46A3Q7Z3Q1 461 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 PXKQ7Z7A4 578 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 UEVLDQ8IX04 471 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 PFN4Q8NHR9 129 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 ACOT11Q8WXI4 607 aaPredicted RBP13.5□□□□□ -0.25
SDC3-203ENST00000471567 MCUR1Q96AQ8 359 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 SLC7A6OSQ96CW6 309 aaPredicted RBP13.5□□□□□ -0.25
SDC3-203ENST00000471567 THTPAQ9BU02 230 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 ACTR6Q9GZN1 396 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 SLCO5A1Q9H2Y9 848 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 NMNAT1Q9HAN9 279 aaPredicted RBP13.5□□□□□ -0.25
SDC3-203ENST00000471567 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 MAN2C1Q9NTJ4 1040 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 RHCGQ9UBD6 479 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 UPB1Q9UBR1 384 aa13.5□□□□□ -0.25
SDC3-203ENST00000471567 A0A1W2PRQ8 180 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 CYSRT1A8MQ03 144 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 PDLIM1O00151 329 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 TRAF3IP2O43734 574 aaPredicted RBP13.49□□□□□ -0.25
SDC3-203ENST00000471567 CTAG2O75638 210 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 PDE5AO76074 875 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 OR7A10O76100 309 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 ZNF432O94892 652 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 HPRP00739 348 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 IGHV3-9P01782 118 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 H1F0P07305 194 aaKnown RBP13.49□□□□□ -0.25
SDC3-203ENST00000471567 ADORA3P0DMS8 318 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 UMPSP11172 480 aa13.49□□□□□ -0.25
SDC3-203ENST00000471567 FUT1P19526 365 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms