RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PLXNA2O75051 1894 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 PLXNB3Q9ULL4 1909 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 IGHV1OR15-9A0A0B4J2B8 117 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 TRBV2A0A0J9YWF9 115 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 A0A1W2PPW3 197 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 FAM47DPA6NHR8 397 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 TMEM150CB9EJG8 249 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 VEGFDO43915 354 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 OR1I1O60431 355 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 VPS26AO75436 327 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 CDK14O94921 469 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 C9P02748 559 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 GSTA1P08263 222 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 OR56A5P0C7T3 313 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 ATP1B2P14415 290 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 CCNA2P20248 432 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 HNRNPA2B1P22626 353 aaKnown RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 AKT2P31751 481 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 MAGEA12P43365 314 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 CRYBA2P53672 197 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 RAB10P61026 200 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 ACY1Q03154 408 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 ZKSCAN8Q15776 578 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 TTMPQ5BVD1 217 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 GPRC6AQ5T6X5 926 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 KCTD16Q68DU8 428 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PTRHD1Q6GMV3 140 aaKnown RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 RAET1GQ6H3X3 334 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 REG3GQ6UW15 175 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 DHRS11Q6UWP2 260 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 NRARPQ7Z6K4 114 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 TBC1D21Q8IYX1 336 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 KRT222Q8N1A0 295 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 KDM8Q8N371 416 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 BANPQ8N9N5 519 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 UXS1Q8NBZ7 420 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 RHOXF1Q8NHV9 184 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 COX14Q96I36 57 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 ELMO2Q96JJ3 720 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 SERAC1Q96JX3 654 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PANX3Q96QZ0 392 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 TSSK1BQ9BXA7 367 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 GPR174Q9BXC1 333 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 LIN28AQ9H9Z2 209 aaKnown RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 SYTL2Q9HCH5 934 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PRMT8Q9NR22 394 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PHPT1Q9NRX4 125 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 GNPTGQ9UJJ9 305 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 GMEB2Q9UKD1 530 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 ACOT9Q9Y305 439 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 DHRS7Q9Y394 339 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 RRP15Q9Y3B9 282 aaKnown RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 STRAPQ9Y3F4 350 aaKnown RBP4.17□□□□□ -1.74
CCDC39-202ENST00000471307 AUP1Q9Y679 476 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 KNL1Q8NG31 2342 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 PLXND1Q9Y4D7 1925 aa4.17□□□□□ -1.74
CCDC39-202ENST00000471307 FAM149AA5PLN7 773 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 C5orf52A6NGY3 159 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 E5RI56 91 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 H3BQF6 201 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 COPEO14579 308 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CHUKO15111 745 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KMOO15229 486 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TM9SF1O15321 606 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SLC31A1O15431 190 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TYROBPO43914 113 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PEX11AO75192 247 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RHOBTB1O94844 696 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KLHL2O95198 593 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SOD1P00441 154 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RENP00797 406 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PDGFBP01127 241 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 FTH1P02794 183 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PCCBP05166 539 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 IGHV4-34P06331 123 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 C2P06681 752 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RBP1P09455 135 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SLC35E2BP0CK96 405 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SPP1P10451 314 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 VCLP18206 1134 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 MAT2AP31153 395 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 FCGR2BP31994 310 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 FCGR2CP31995 323 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CA5AP35218 305 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 OR3A3P47888 321 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CDX1P47902 265 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 NPBWR1P48145 328 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KPNA2P52292 529 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CDKN2DP55273 166 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SLC26A5P58743 744 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TAS2R39P59534 338 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 ATP6V0D1P61421 351 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PLOD1Q02809 727 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 OVGP1Q12889 678 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 IRF4Q15306 451 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 FAM83EQ2M2I3 478 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF528Q3MIS6 628 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TTLL9Q3SXZ7 439 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CCDC153Q494R4 210 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms