RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CLDN14O95500 239 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 YES1P07947 543 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 CD8BP10966 210 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 GRPRP30550 384 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 RRM2P31350 389 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 LIMS1P48059 325 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 SPIBQ01892 262 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 FBXL19-AS1Q494R0 122 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF730Q6ZMV8 503 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC46A3Q7Z3Q1 461 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 LIX1LQ8IVB5 337 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMEM99Q8N816 258 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF417Q8TAU3 575 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 CA5BP1Q8WTZ4 195 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 DUS3LQ96G46 650 aaKnown RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF587Q96SQ5 575 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 ASPNQ9BXN1 380 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 CHST11Q9NPF2 352 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 NANSQ9NR45 359 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 C20orf141Q9NUB4 165 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 JKAMPQ9P055 326 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 AURKCQ9UQB9 309 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 TESMINQ9Y4I5 508 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR7A10O76100 309 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CH25HO95992 272 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 TSPAN19P0C672 248 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 BMP5P22003 454 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 HMGA2P52926 109 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 PRKCDQ05655 676 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CCNIQ14094 377 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CDSNQ15517 529 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMEM201Q5SNT2 666 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 VWA1Q6PCB0 445 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 H1FNTQ75WM6 255 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CCDC103Q8IW40 242 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CNEP1R1Q8N9A8 125 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 STARD4Q96DR4 205 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 BPIFA2Q96DR5 249 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 SGTBQ96EQ0 304 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 CHID1Q9BWS9 393 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 B3GAT1Q9P2W7 334 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZFHX3Q15911 3703 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 LRRN3E7EW58 273 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 MSTNO14793 375 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 PIP5K1CO60331 668 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 FKBP6O75344 327 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 CGAP01215 116 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 ACTR3P61158 418 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 PUDPQ08623 228 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 TMEM225Q6GV28 225 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR2T5Q6IEZ7 315 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 TMPRSS11FQ6ZWK6 438 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR2T29Q8NH02 315 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 TMEM45BQ96B21 275 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 C6orf203Q9P0P8 240 aaPredicted RBP13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 FLVCR1Q9Y5Y0 555 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 SPG11Q96JI7 2443 aa13.27□□□□□ -0.29
CDC42SE1-203ENST00000470278 PLPP3O14495 311 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 HNRNPRO43390 633 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 IFI30P13284 250 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 NQO1P15559 274 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 PCYT1AP49585 367 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ASCL1P50553 236 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 RPS4XP62701 263 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 SIRPAP78324 504 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 TFF3Q07654 80 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZP4Q12836 540 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 SEC23BQ15437 767 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 ANKDD1AQ495B1 522 aa13.26□□□□□ -0.29
CDC42SE1-203ENST00000470278 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms