RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 PLPP3O14495 311 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 TSPAN19P0C672 248 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 IFI30P13284 250 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 AGTR1P30556 359 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 LIMS1P48059 325 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 P2RY4P51582 365 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 UGT2B15P54855 530 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 PRPS1P60891 318 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 LTBQ06643 244 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 PUDPQ08623 228 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 C1DQ13901 141 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 HDDC2Q7Z4H3 204 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 CCDC71Q8IV32 467 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 CCDC103Q8IW40 242 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 TUSC5Q8IXB3 177 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 CNEP1R1Q8N9A8 125 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 NAXEQ8NCW5 288 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 OR4K5Q8NGD3 323 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 OR9K2Q8NGE7 335 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF417Q8TAU3 575 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 STARD4Q96DR4 205 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 MOGAT1Q96PD6 335 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 BDH2Q9BUT1 245 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 OSBPL10Q9BXB5 764 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 ELOVL5Q9NYP7 299 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 ING1Q9UK53 422 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 RCE1Q9Y256 329 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 TRBV4-1A0A0J9YWV2 114 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 A8MXE2 369 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 MS4A18H0YCH9 400 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 CLOCKO15516 846 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 DIRAS1O95057 198 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 CGAP01215 116 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 BMP5P22003 454 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 FASP25445 335 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 DNAJA1P31689 397 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 ASCL1P50553 236 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 SRSF1Q07955 248 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 COX10Q12887 443 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 FOXF2Q12947 444 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 CCNIQ14094 377 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 P2RY6Q15077 328 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 MS4A18Q3C1V0 323 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 C1orf94Q6P1W5 598 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 CREB3L2Q70SY1 520 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 SSX8Q7RTT4 187 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 OAFQ86UD1 273 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 GPAT4Q86UL3 456 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 KIF18BQ86Y91 864 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 UEVLDQ8IX04 471 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 OR52J3Q8NH60 311 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 APH1AQ96BI3 265 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 ADAD1Q96M93 576 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 HDHD5Q9BXW7 423 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 C20orf141Q9NUB4 165 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 SAMHD1Q9Y3Z3 626 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 FLVCR1Q9Y5Y0 555 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 ARHGAP21Q5T5U3 1957 aa11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 DIDO1Q9BTC0 2240 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-204ENST00000469778 FLNCQ14315 2725 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 CENPBD1B2RD01 187 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF814B7Z6K7 855 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 PYCARD-AS1I3L0S3 204 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 OR10H3O60404 316 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 CCNB2O95067 398 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 ADORA3P0DMS8 318 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 GSTM3P21266 225 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 FPR3P25089 353 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 OMPP47874 163 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 OR3A2P47893 321 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 RPS4XP62701 263 aaKnown RBP11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 MICAQ29983 383 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 RPL13AP3Q6NVV1 102 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC46A3Q7Z3Q1 461 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 ABHD12BQ7Z5M8 362 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF100Q8IYN0 542 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 POMGNT2Q8NAT1 580 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 OR4C15Q8NGM1 316 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 PFN4Q8NHR9 129 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 GNPDA2Q8TDQ7 276 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 DNAJC9Q8WXX5 260 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 TAS2R5Q9NYW4 299 aa11.22□□□□□ -0.61
SPTLC1-204ENST00000469778 MGAT4BQ9UQ53 548 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms