RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 IZUMO1Q8IYV9 350 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 KDM8Q8N371 416 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 AKAP1Q92667 903 aaKnown RBP eCLIP8.63□□□□□ -1.032e-8■■■■□ 21.1
TOP3A-203ENST00000469739 Q96M85 177 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 MCCC2Q9HCC0 563 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 BABAM2Q9NXR7 383 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 NTMQ9P121 344 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 RNF215Q9Y6U7 377 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 A0A1B0GTH9 108 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 HLA-DPB1P04440 258 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 CSF3P09919 207 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 INPP1P49441 399 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 NR0B1P51843 470 aaKnown RBP8.63□□□□□ -1.03
TOP3A-203ENST00000469739 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.63□□□□□ -1.03
TOP3A-203ENST00000469739 ZMYND11Q15326 602 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 NSDHLQ15738 373 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 TOMM34Q15785 309 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-203ENST00000469739 LANCL3Q6ZV70 420 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 ZBTB44Q8NCP5 570 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 ENKURQ8TC29 256 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 FBXW5Q969U6 566 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 ZNF578Q96N58 590 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-203ENST00000469739 MOGAT1Q96PD6 335 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 STACQ99469 402 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 DPYSL5Q9BPU6 564 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 ZNF649Q9BS31 505 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 CRB3Q9BUF7 120 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 SRRQ9GZT4 340 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 HDHD2Q9H0R4 259 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 UBE2ZQ9H832 354 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-203ENST00000469739 CLDN16Q9Y5I7 305 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 SPTBN2O15020 2390 aa8.63□□□□□ -1.03
TOP3A-203ENST00000469739 RNF13O43567 381 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 HCRTR2O43614 444 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 CDC40O60508 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 HCN1O60741 890 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 TRIM3O75382 744 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 FBXO24O75426 580 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 HOXD4P09016 255 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SBK2P0C263 348 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 FOLR1P15328 257 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ZNF3P17036 446 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 AHCYP23526 432 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 KIR2DL3P43628 341 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 EFNA3P52797 238 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ARFIP1P53367 373 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 MRPL28Q13084 256 aaKnown RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 PRTGQ2VWP7 1150 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SLC25A35Q3KQZ1 300 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 PLET1Q6UQ28 207 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 TEX261Q6UWH6 196 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 KANSL1Q7Z3B3 1105 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 Q8N402 240 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 LNX2Q8N448 690 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ZNF433Q8N7K0 673 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 OR2I1PQ8NGU4 316 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 GCDHQ92947 438 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 KCNK17Q96T54 332 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 RNF32Q9H0A6 362 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SLC6A5Q9Y345 797 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 U3KQ87 197 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 BDP1A6H8Y1 2624 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 FREM3P0C091 2139 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 TEX13CA0A0J9YWL9 993 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 CHP2O43745 196 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 GDF9O60383 454 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 TFP02787 698 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SRFP11831 508 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 DRD5P21918 477 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 GPR3P46089 330 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 CCR5P51681 352 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 PER3P56645 1201 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 RIN1Q13671 783 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 AANATQ16613 207 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 RTL4Q6ZR62 310 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 GKN2Q86XP6 184 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ZNF680Q8NEM1 530 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 OR8K3Q8NH51 312 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SNX33Q8WV41 574 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 GHSRQ92847 366 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 HYLS1Q96M11 299 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ZFP3Q96NJ6 502 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 TIMP4Q99727 224 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 NUDT22Q9BRQ3 303 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 SLC25A18Q9H1K4 315 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 B3GAT2Q9NPZ5 323 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 CMC2Q9NRP2 79 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 CUTCQ9NTM9 273 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 NLKQ9UBE8 527 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ELF5Q9UKW6 265 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-203ENST00000469739 RASD1Q9Y272 281 aa8.62□□□□□ -1.03
TOP3A-203ENST00000469739 ALG5Q9Y673 324 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms