RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OGFOD2Q6N063 350 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 SPATA21Q7Z572 469 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 ABHD12BQ7Z5M8 362 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-204ENST00000469207 WDFY1Q8IWB7 410 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF440Q8IYI8 595 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 LRRC34Q8IZ02 419 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 CDK20Q8IZL9 346 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 TMEM19Q96HH6 336 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 TMEM109Q9BVC6 243 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 CENPHQ9H3R5 247 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 DSPPQ9NZW4 1301 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 ARPC4-TTLL3A0A0A6YYG9 625 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF432O94892 652 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 VAMP5O95183 116 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 KRT75O95678 551 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 IGKV3-15P01624 115 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 CBR1P16152 277 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 DSTNP60981 165 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 CEACAM16Q2WEN9 425 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 LIN52Q52LA3 116 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 KRT80Q6KB66 452 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 CARM1Q86X55 608 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 MAL2Q969L2 176 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 TAAR8Q969N4 342 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 SNX18Q96RF0 628 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 LINC00470Q9BZP3 86 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 RAB1BQ9H0U4 201 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 TPK1Q9H3S4 243 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 PIF1Q9H611 641 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 TPT1P8Q9HAU6 139 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 GPR35Q9HC97 309 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 OBP2BQ9NPH6 170 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 B3GAT1Q9P2W7 334 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 P2RX2Q9UBL9 471 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 RASD1Q9Y272 281 aa10.61□□□□□ -0.71
HDAC3-204ENST00000469207 IGHV2OR16-5A0A0B4J2B6 119 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 OR6C65A6NJZ3 312 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ADRA2AP08913 450 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 HLA-DOBP13765 273 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF43P17038 809 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 TCN1P20061 433 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-204ENST00000469207 NPR2P20594 1047 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 COL8A2P25067 703 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 GIFP27352 417 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 CAPZA2P47755 286 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 PPOXP50336 477 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ANXA11P50995 505 aaKnown RBP10.6□□□□□ -0.71
HDAC3-204ENST00000469207 CRISP3P54108 245 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 AQP5P55064 265 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 PIGFQ07326 219 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 CCNIQ14094 377 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ADRM1Q16186 407 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 SLC9B1Q4ZJI4 515 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF311Q5JNZ3 666 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 CARD17Q5XLA6 110 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 MDP1Q86V88 176 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 COMTD1Q86VU5 262 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ANKRD42Q8N9B4 389 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 NUP37Q8NFH4 326 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 OR4F15Q8NGB8 312 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 OR9I1Q8NGQ6 314 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 MFSD8Q8NHS3 518 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 MAGEE2Q8TD90 523 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-204ENST00000469207 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 EMC6Q9BV81 110 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 SPATA9Q9BWV2 254 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 NOX3Q9HBY0 568 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 CRLF2Q9HC73 371 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 TMEFF2Q9UIK5 374 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF232Q9UNY5 417 aa10.6□□□□□ -0.71
HDAC3-204ENST00000469207 MS4A18H0YCH9 400 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 RPL36A-HNRNPH2H7BZ11 118 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 M0R082 166 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 M0R3G1 203 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 TM9SF1O15321 606 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 SLC22A3O75751 556 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 PDE5AO76074 875 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 AHSA1O95433 338 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ANP32DO95626 131 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 HPRP00739 348 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 HLA-HP01893 362 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 TACSTD2P09758 323 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ITGA2P17301 1181 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 HNF1AP20823 631 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 APEX1P27695 318 aaKnown RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 GRPRP30550 384 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 SQLEQ14534 574 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 LARS2Q15031 903 aaKnown RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 MS4A18Q3C1V0 323 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 RNF220Q5VTB9 566 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 LIPNQ5VXI9 398 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 LRP11Q86VZ4 500 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF786Q8N393 782 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF540Q8NDQ6 660 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 STK35Q8TDR2 534 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms