RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 CARD16Q5EG05 197 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 TMEM179BQ7Z7N9 219 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 CCDC65Q8IXS2 484 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 TMEM252Q8N6L7 170 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 BBS1Q8NFJ9 593 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 OR52I1Q8NGK6 324 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 OR9A1PQ8NGU1 263 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 NT5C3BQ969T7 300 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 C16orf74Q96GX8 76 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 SMIM14Q96QK8 99 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 RNF2Q99496 336 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 COPS8Q99627 209 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 YTHDF1Q9BYJ9 559 aaKnown RBP3.6□□□□□ -1.83
LSM5-209ENST00000468872 PLSCR3Q9NRY6 295 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 MARCH5Q9NX47 278 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 STAP1Q9ULZ2 295 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 ABCG2Q9UNQ0 655 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 PIGLQ9Y2B2 252 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 UGT2A1Q9Y4X1 527 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 ZDBF2Q9HCK1 2354 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 GOLGA3Q08378 1498 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 CASP8AP2Q9UKL3 1982 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 CEP290O15078 2479 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 ASH1LQ9NR48 2969 aaKnown RBP3.6□□□□□ -1.83
LSM5-209ENST00000468872 SLIT1O75093 1534 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 THSD7AQ9UPZ6 1657 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 PCP4L1A6NKN8 68 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 FOXE1O00358 373 aaPredicted RBP3.59□□□□□ -1.83
LSM5-209ENST00000468872 HDAC3O15379 428 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 MED7O43513 233 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 HCRTR1O43613 425 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 STAMBPO95630 424 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 TSPAN12O95859 305 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 ANXA13P27216 316 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 CALCRP30988 508 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 RGRP47804 291 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 CRYBB1P53674 252 aaPredicted RBP3.59□□□□□ -1.83
LSM5-209ENST00000468872 PKNOX1P55347 436 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 STX17P56962 302 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 DDX39BQ13838 428 aaKnown RBP3.59□□□□□ -1.83
LSM5-209ENST00000468872 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 FHL5Q5TD97 284 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 UQCC3Q6UW78 93 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 SCARA5Q6ZMJ2 495 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 TRIM69Q86WT6 500 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 ALLCQ8N6M5 410 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 OR52H1Q8NGJ2 320 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 FAM110BQ8TC76 370 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 OR1E3Q8WZA6 343 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 FGF11Q92914 225 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 TECTBQ96PL2 329 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 NICN1Q9BSH3 213 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 RBKSQ9H477 322 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 SGK2Q9HBY8 427 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 CD274Q9NZQ7 290 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 IL17CQ9P0M4 197 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 COPS3Q9UNS2 423 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 TTC21BQ7Z4L5 1316 aa3.59□□□□□ -1.83
LSM5-209ENST00000468872 ZNF318Q5VUA4 2279 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 A0A1B0GVL5 298 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 TCRBV9S1A1TA0A576 114 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 GFYI3L273 518 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 HAT1O14929 419 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 PALMO75781 387 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 PBLDP30039 288 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 DDOSTP39656 456 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 DUSP7Q16829 419 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 KLHL38Q2WGJ6 581 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 RABL6Q3YEC7 729 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 BCL7AQ4VC05 210 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 RSBN1Q5VWQ0 802 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 OR2A2Q6IF42 318 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 PGAP1Q75T13 922 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 VRK2Q86Y07 508 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 TGIF2LYQ8IUE0 185 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 DEFB123Q8N688 67 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 OR4K14Q8NGD5 310 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 OR2AP1Q8NGE2 309 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 OR1L4Q8NGR5 311 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 MAGEE2Q8TD90 523 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 C7orf33Q8WU49 177 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 ANKRD49Q8WVL7 239 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 N4BP2L2Q92802 583 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 SEC22AQ96IW7 307 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 B3GALT6Q96L58 329 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 MAGEB18Q96M61 343 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 CLCC1Q96S66 551 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 TRIM62Q9BVG3 475 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 ROPN1BQ9BZX4 212 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 OR51J1Q9H342 316 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 REEP4Q9H6H4 257 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 NHEJ1Q9H9Q4 299 aaPredicted RBP3.58□□□□□ -1.84
LSM5-209ENST00000468872 HOXC10Q9NYD6 342 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 IFT52Q9Y366 437 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 IKBKGQ9Y6K9 419 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 SH3TC1Q8TE82 1336 aa3.58□□□□□ -1.84
LSM5-209ENST00000468872 KIDINS220Q9ULH0 1771 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms