RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ROR2Q01974 943 aaKnown RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 EFNB3Q15768 340 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 C3orf36Q3SXR2 165 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 PDCD4Q53EL6 469 aaKnown RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 ATG16L1Q676U5 607 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 OR4F15Q8NGB8 312 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 MFSD8Q8NHS3 518 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 MAGEE2Q8TD90 523 aaPredicted RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 STK35Q8TDR2 534 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 TMEM19Q96HH6 336 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 SPATA9Q9BWV2 254 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 LINC00470Q9BZP3 86 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 PLK3Q9H4B4 646 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 RMND5AQ9H871 391 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 MOV10Q9HCE1 1003 aaKnown RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 THUMPD1Q9NXG2 353 aaKnown RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 CHST2Q9Y4C5 530 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 A0A0G2JPF8 293 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 HNRNPCL2B2RXH8 293 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 HNRNPCL3B7ZW38 293 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 HNRNPCL1O60812 293 aaKnown RBP14.99□□□□□ -0.01
TRIM56-203ENST00000467847 IGLV1-44P01699 117 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 ZCCHC18P0CG32 403 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 HNRNPCL4P0DMR1 293 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 PNMTP11086 282 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF43P17038 809 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 GTF2E2P29084 291 aaKnown RBP14.99□□□□□ -0.01
TRIM56-203ENST00000467847 CALCRP30988 508 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 PPOXP50336 477 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 CLDN17P56750 224 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 GTDC1Q4AE62 458 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF311Q5JNZ3 666 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 KDM8Q8N371 416 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 FAM169BQ8N8A8 192 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF540Q8NDQ6 660 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 ITCHQ96J02 903 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 C19orf24Q9BVV8 132 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 BPESC1Q9GZL8 116 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 RAB1BQ9H0U4 201 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 NELFAQ9H3P2 528 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 SEC61A2Q9H9S3 476 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 THAP1Q9NVV9 213 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 IFT52Q9Y366 437 aa14.99□□□□□ -0.01
TRIM56-203ENST00000467847 FTCDNL1E5RQL4 147 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 TGFAP01135 160 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 HOXB1P14653 301 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF23P17027 643 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 IDH3GP51553 393 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 ARF1P84077 181 aaKnown RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 HOXC5Q00444 222 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 SRSF2Q01130 221 aaKnown RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 C6orf10Q5SRN2 563 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 ANKK1Q8NFD2 765 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 NUP37Q8NFH4 326 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 VPS33AQ96AX1 596 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 KTI12Q96EK9 354 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 PTDSS2Q9BVG9 487 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 PARD6BQ9BYG5 372 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 SEC14L4Q9UDX3 406 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 FBXO9Q9UK97 447 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-203ENST00000467847 RCE1Q9Y256 329 aa14.98□□□□□ -0.01
TRIM56-203ENST00000467847 SLCO1B7G3V0H7 640 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 RPL36A-HNRNPH2H7BZ11 118 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 hCG_2039718K7EN88 272 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 SNNO75324 88 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 SLC43A1O75387 559 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 IGKV3-15P01624 115 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 ERCC1P07992 297 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 CELA3BP08861 270 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 THBS4P35443 961 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 POLR2JP52435 117 aaKnown RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 HGFACQ04756 655 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 EGR4Q05215 589 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 C1DQ13901 141 aaKnown RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 MSANTD1Q6ZTZ1 278 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 MYPOPQ86VE0 399 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 GPR137CQ8N3F9 429 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 MGARPQ8TDB4 240 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 OXGR1Q96P68 337 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF442Q9H7R0 627 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 SDR39U1Q9NRG7 319 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-203ENST00000467847 ZIM2Q9NZV7 527 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 RPS6KB2Q9UBS0 482 aa14.97□□□□□ -0.01
TRIM56-203ENST00000467847 ANK2Q01484 3957 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 VSTM5A8MXK1 200 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF432O94892 652 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 DAOP14920 347 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 CBR1P16152 277 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 NPR2P20594 1047 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 WDR4P57081 412 aaKnown RBP14.96□□□□□ -0.01
TRIM56-203ENST00000467847 IL1RL1Q01638 556 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 NPRL3Q12980 569 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 SLC9B1Q4ZJI4 515 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 SVOPLQ8N434 492 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 MAL2Q969L2 176 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 SLC35B4Q969S0 331 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 MAELQ96JY0 434 aaKnown RBP14.96□□□□□ -0.01
TRIM56-203ENST00000467847 ANKRD27Q96NW4 1050 aa14.96□□□□□ -0.01
TRIM56-203ENST00000467847 SOX7Q9BT81 388 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms