RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	WDYHV1	Q96HA8	205 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	NIPSNAP1	Q9BPW8	284 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	OR2B2	Q9GZK3	357 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	MCCC2	Q9HCC0	563 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	IL20	Q9NYY1	176 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	NDRG4	Q9ULP0	352 aa	Known RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	BAIAP2	Q9UQB8	552 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	PDZD2	O15018	2839 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	ADGRG4	Q8IZF6	3080 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	CD8B2	A6NJW9	211 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663		A8MVM7	634 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	KDM4E	B2RXH2	506 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	OIP5	O43482	229 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	MT-ATP6	P00846	226 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	IFI30	P13284	250 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	CPN1	P15169	458 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF17	P17021	662 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	PRKCA	P17252	672 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	ELK4	P28324	431 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	TPD52	P55327	224 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	KRTAP10-9	P60411	292 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	IL1RL1	Q01638	556 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	C6orf52	Q5T4I8	152 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	POMZP3	Q6PJE2	187 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	NAXE	Q8NCW5	288 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	GTPBP3	Q969Y2	492 aa	Known RBP	10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	SGTB	Q96EQ0	304 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	C1GALT1C1	Q96EU7	318 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	MBOAT4	Q96T53	435 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	POTEKP	Q9BYX7	375 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	DSN1	Q9H410	356 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	RIBC2	Q9H4K1	309 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC24A3	Q9HC58	644 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	MED17	Q9NVC6	651 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	REV1	Q9UBZ9	1251 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	KCNN3	Q9UGI6	736 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	OSGIN1	Q9UJX0	560 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	CAMK2A	Q9UQM7	478 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	GMPPB	Q9Y5P6	360 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	HCFC1	P51610	2035 aa		10.82	□□□□□ -0.68
CTNS-205	ENST00000467663	TRAV36DV7	A0A075B6V5	113 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MBD3L3	A6NE82	208 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	UNC119B	A6NIH7	251 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	ZAR1L	A6NP61	321 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	EFCAB9	A8MZ26	197 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663		M0R3G1	203 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	NTN1	O95631	604 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	CHM	P24386	653 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	SRD5A2	P31213	254 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	GGT2	P36268	569 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	GFRA1	P56159	465 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	PRPS1	P60891	318 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	CDC42	P60953	191 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	TOP3A	Q13472	1001 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	PDK3	Q15120	406 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	PLPPR5	Q32ZL2	321 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	ZIK1	Q3SY52	487 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF691	Q5VV52	312 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	WDR88	Q6ZMY6	472 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	THAP5	Q7Z6K1	395 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	GALNT5	Q7Z7M9	940 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	OR52L1	Q8NGH7	329 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	OR14L1P	Q8NHC6	308 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	TEX47	Q8TBZ9	253 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	ZPLD1	Q8TCW7	415 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	DDIT4L	Q96D03	193 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	FKRP	Q9H9S5	495 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	CALHM2	Q9HA72	323 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC25A19	Q9HC21	320 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MEPE	Q9NQ76	525 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	MED11	Q9P086	117 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	CHRNA9	Q9UGM1	479 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	FBXL2	Q9UKC9	423 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	TMED7	Q9Y3B3	224 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF337	Q9Y3M9	751 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663	CDH10	Q9Y6N8	788 aa		10.81	□□□□□ -0.68
CTNS-205	ENST00000467663		B4DXG7	233 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663		H3BN98	237 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	DVL2	O14641	736 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	ZIC3	O60481	467 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	MITF	O75030	526 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	NPIPB7	O75200	414 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	OR7A10	O76100	309 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	AHSA1	O95433	338 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	IL2RA	P01589	272 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	HMGN1	P05114	100 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	SAG	P10523	405 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	POU2F1	P14859	743 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	GIPR	P48546	466 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	RNF144A	P50876	292 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	CXCR4	P61073	352 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	CDK5	Q00535	292 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	SELENBP1	Q13228	472 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	PTGES3	Q15185	160 aa	Known RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	FBXL19-AS1	Q494R0	122 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms