RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 BORCS8Q96FH0 119 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF224Q9NZL3 707 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 A6NLC8 198 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CTSVO60911 334 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 SQSTM1Q13501 440 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 DGLUCYQ7Z3D6 616 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 FER1L6-AS2Q96M78 137 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 A3GALT2U3KPV4 340 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CROCCQ5TZA2 2017 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 GLCEO94923 617 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 WDPCPO95876 746 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 DRD5P21918 477 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF81P51508 661 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 RRADP55042 308 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 S100A10P60903 97 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 PCGF3Q3KNV8 242 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 IQCF2Q8IXL9 164 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 NANOGP1Q8N7R0 232 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ZBTB8BQ8NAP8 495 aaPredicted RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 NINJ1Q92982 152 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CDH20Q9HBT6 801 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 PLXNA1Q9UIW2 1896 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 A0A1W2PQ09 198 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 LINC00299Q6ZSB3 139 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 KIAA0907Q7Z7F0 614 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ABHD4Q8TB40 342 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 PHYHIPQ92561 330 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 PARPBPQ9NWS1 579 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 WASF3Q9UPY6 502 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 NTNG1Q9Y2I2 539 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ATP1B1P05026 303 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SBK2P0C263 348 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 APOBEC1P41238 236 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 PTH2RP49190 550 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 MTNR1BP49286 362 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 C21orf58P58505 322 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 PUDPQ08623 228 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 MELKQ14680 651 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SYNPRQ8TBG9 265 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 DHRS1Q96LJ7 313 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF850A8MQ14 1090 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SLC43A1O75387 559 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 MRPL33O75394 65 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 CD79AP11912 226 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 CASP6P55212 293 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 BIDP55957 195 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 CAMK2DQ13557 499 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ADPRMQ3LIE5 342 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 GXYLT1Q4G148 440 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 H1FNTQ75WM6 255 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF615Q8N8J6 731 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 PIGQQ9BRB3 760 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 C7orf50Q9BRJ6 194 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 OR10A4Q9H209 315 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 SPERTQ8NA61 448 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 NPRL2Q8WTW4 380 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 RASD2Q96D21 266 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 LAT2Q9GZY6 243 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 NXF5Q9H1B4 397 aaKnown RBP12.68□□□□□ -0.38
BRAT1-203ENST00000467558 CACNG2Q9Y698 323 aa12.68□□□□□ -0.38
BRAT1-203ENST00000467558 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 BOLA2-SMG1P6H3BVE0 249 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 SCGB1D2O95969 90 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 IL7P13232 177 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 CLDN17P56750 224 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 Q499Y3 187 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 ITFG2Q969R8 447 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 C7orf34Q96L11 122 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 LRFN5Q96NI6 719 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 CHRNA9Q9UGM1 479 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 TMA7Q9Y2S6 64 aaKnown RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 G3V3Y1 287 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 M0R233 179 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms