RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 P2RY8Q86VZ1 359 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 KDM8Q8N371 416 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 PROX1Q92786 737 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 GTPBP3Q969Y2 492 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 PTDSS2Q9BVG9 487 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 GMPR2Q9P2T1 348 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 UPB1Q9UBR1 384 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC9A8Q9Y2E8 581 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 AP3M1Q9Y2T2 418 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 SH3GLB1Q9Y371 365 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 RNF115Q9Y4L5 304 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 FN1P02751 2386 aaKnown RBP12.4□□□□□ -0.43
CCHCR1-211ENST00000467553 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 CIB4A0PJX0 185 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 GSTA4O15217 222 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 OR2T1O43869 369 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 FMO6PO60774 539 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 VAMP5O95183 116 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 IFNA14P01570 189 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 TNFRSF1BP20333 461 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 IGHV1-2P23083 117 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 KDELR2P33947 212 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 CRYBA2P53672 197 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 ATP5J2P56134 94 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 LIPEQ05469 1076 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 FAPQ12884 760 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF613Q6PF04 617 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 C5orf46Q6UWT4 87 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 AAED1Q7RTV5 226 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 CARM1Q86X55 608 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 ZIC4Q8N9L1 334 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 GRIP2Q9C0E4 1043 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 BAG5Q9UL15 447 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 RASD1Q9Y272 281 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 PRR14LQ5THK1 2151 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 JMJD1CQ15652 2540 aa12.39□□□□□ -0.43
CCHCR1-211ENST00000467553 FTCDNL1E5RQL4 147 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 OVOL3O00110 214 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 PLAUP00749 431 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 GRPRP30550 384 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 P2RY4P51582 365 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 SLC7A2P52569 658 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 IL1RL1Q01638 556 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 TAB1Q15750 504 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 STK11Q15831 433 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 FAM69AQ5T7M9 428 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 C9orf135Q5VTT2 229 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 CREB3L2Q70SY1 520 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 ADAMTS16Q8TE57 1224 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 TPD52L3Q96J77 140 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 RADILQ96JH8 1075 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 EPYCQ99645 322 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 ASB6Q9NWX5 421 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 SEC14L4Q9UDX3 406 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 ARL2BPQ9Y2Y0 163 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 CSPG4Q6UVK1 2322 aa12.38□□□□□ -0.43
CCHCR1-211ENST00000467553 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TRAPPC13A5PLN9 417 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TRIM64A6NGJ6 449 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TRIM64BA6NI03 449 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 M0R082 166 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 NME4O00746 187 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 CHP2O43745 196 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 KRT33AO76009 404 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF43P17038 809 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 GGT1P19440 569 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 PRDX6P30041 224 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 OR1E2P47887 323 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 FOXG1P55316 489 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 PSME3P61289 254 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 C1DQ13901 141 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TIMM23BQ5SRD1 257 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 LINC00114Q6XXX2 140 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 HACD2Q6Y1H2 254 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 DEF8Q6ZN54 512 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 H1FNTQ75WM6 255 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF433Q8N7K0 673 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
CCHCR1-211ENST00000467553 TMEM45BQ96B21 275 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms