RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 LOC110117498-PIK3R3F6TDL0 507 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 J3QLW9 94 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 RNF13O43567 381 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 OR2J2O76002 312 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 MT-ND5P03915 603 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF19P17023 458 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 NAGAP17050 411 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 ISXQ2M1V0 245 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 CCDC157Q569K6 752 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 BICRALQ6AI39 1079 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 LYPD8Q6UX82 237 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 SSX6Q7RTT6 188 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 MISPQ8IVT2 679 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 NEIL3Q8TAT5 605 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 ZNRF4Q8WWF5 429 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 ASB15Q8WXK1 588 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 Q96M85 177 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 CMKLR1Q99788 373 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 TAS2R10Q9NYW0 307 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 ZMIZ1Q9ULJ6 1067 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 TMED7-TICAM2A0A0A6YYA0 188 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 B4E171 279 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 C9J4A7 227 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 DVL2O14641 736 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 NAA10P41227 235 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TSPAN7P41732 249 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 POLR2HP52434 150 aaKnown RBP16.55■□□□□ 0.24
COL9A3-205ENST00000466192 OR12D2P58182 307 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 POU4F2Q12837 409 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 ALG10Q5BKT4 473 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 FAM122BQ7Z309 247 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 ADGRG3Q86Y34 549 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 ELP5Q8TE02 316 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 RNF138Q8WVD3 245 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 COQ7Q99807 217 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF229Q9UJW7 825 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TMED7Q9Y3B3 224 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 CMAHPQ9Y471 501 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TEX13CA0A0J9YWL9 993 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 CDX4O14627 284 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-205ENST00000466192 IDH3BO43837 385 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 SUSD5O60279 629 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 BGLAPP02818 100 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 F13BP05160 661 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 CD14P08571 375 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 CD59P13987 128 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 RPL18Q07020 188 aaKnown RBP16.55■□□□□ 0.24
COL9A3-205ENST00000466192 C17orf67Q0P5P2 114 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 BCL2A1Q16548 175 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 BTBD16Q32M84 506 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TMEM53Q6P2H8 277 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TMEM91Q6ZNR0 172 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 GRINAQ7Z429 371 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 NLGN4YQ8NFZ3 816 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-205ENST00000466192 MARCH7Q9H992 704 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 FKRPQ9H9S5 495 aa16.55■□□□□ 0.24
COL9A3-205ENST00000466192 TRAV36DV7A0A075B6V5 113 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 IGHV1-45A0A0A0MS14 117 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 SHISA3A0PJX4 238 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 TMEM72A0PK05 275 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ISPDA4D126 451 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 TFP02787 698 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 CELA2AP08217 269 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 CTXN1P60606 82 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ACTC1P68032 377 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ACTA1P68133 377 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 GPR50Q13585 617 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 PON3Q15166 354 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 SF3A2Q15428 464 aaKnown RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ARL9Q6T311 187 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 RPTNQ6XPR3 784 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 NANOGNBQ7Z5D8 188 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 GPALPP1Q8IXQ4 340 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 POC5Q8NA72 575 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 MINDY2Q8NBR6 621 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 OR6K6Q8NGW6 343 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 TTC9Q92623 222 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 CNN2Q99439 309 aaKnown RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 SDHCQ99643 169 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 NPAS1Q99742 590 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 PTDSS2Q9BVG9 487 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 DEFB126Q9BYW3 111 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 NMNAT2Q9BZQ4 307 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ABCB9Q9NP78 766 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 WDR70Q9NW82 654 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 UGT2A1Q9Y4X1 527 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 HRH3Q9Y5N1 445 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 MAGEB4O15481 346 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 NPIPB7O75200 414 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 SLC25A12O75746 678 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF24P17028 368 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 SPI1P17947 270 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 CDKN2AP42771 156 aaKnown RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 E2F1Q01094 437 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 LEG1Q6P5S2 330 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 VASH1Q7L8A9 365 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-205ENST00000466192 OR10G3Q8NGC4 313 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 C14orf119Q9NWQ9 140 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 LOXL2Q9Y4K0 774 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms