RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SERPINF1P36955 418 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 ACAA2P42765 397 aaKnown RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 P2RY4P51582 365 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 SNRPD2P62316 118 aaKnown RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 STX3Q13277 289 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 MPP2Q14168 576 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 MAPK11Q15759 364 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 KRT71Q3SY84 523 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 TBRG1Q3YBR2 411 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 FBLN7Q53RD9 439 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 TMEM225Q6GV28 225 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 WBP2NLQ6ICG8 309 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 OGFOD2Q6N063 350 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 ZNF836Q6ZNA1 936 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 SPATA19Q7Z5L4 167 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 ABHD12BQ7Z5M8 362 aaPredicted RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 GLCCI1Q86VQ1 547 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 VRK2Q86Y07 508 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 KIRREL3Q8IZU9 778 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 OR1K1Q8NGR3 316 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 OR52P1PQ8NH57 321 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 BCL2L2Q92843 193 aaPredicted RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 SLC38A2Q96QD8 506 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 VRK1Q99986 396 aaPredicted RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 KCNS3Q9BQ31 491 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 PIF1Q9H611 641 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 UNKLQ9H9P5 680 aaKnown RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 OBP2BQ9NPH6 170 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 AIG1Q9NVV5 245 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 ADPRHL2Q9NX46 363 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 A8MVM7 634 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 ZNF587BE7ETH6 402 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 NR5A2O00482 541 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 SDHDO14521 159 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 TM9SF1O15321 606 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 KRT75O95678 551 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 CRYAAP02489 173 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 HKR1P10072 659 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 PRG2P13727 222 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 GIFP27352 417 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 SELENOPP49908 381 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 UBE2NP61088 152 aaKnown RBP8.42□□□□□ -1.06
USP39-212ENST00000465514 COPZ1P61923 177 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 UBA52P62987 128 aaKnown RBP8.42□□□□□ -1.06
USP39-212ENST00000465514 TUBA1BP68363 451 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 TUBA4AP68366 448 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 LRRC74AQ0VAA2 488 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 BST1Q10588 318 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 TRIP10Q15642 601 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 OCLNQ16625 522 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 LIN52Q52LA3 116 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 NIPAL3Q6P499 406 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 ANKRD16Q6P6B7 361 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 CREB3L2Q70SY1 520 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 LINGO2Q7L985 606 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 ZDHHC22Q8N966 263 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 TRIM44Q96DX7 344 aaPredicted RBP8.42□□□□□ -1.06
USP39-212ENST00000465514 ZBTB18Q99592 522 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 SLC6A7Q99884 636 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 KATNB1Q9BVA0 655 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 KCNK9Q9NPC2 374 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 CA10Q9NS85 328 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 SLC6A13Q9NSD5 602 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 HIF1ANQ9NWT6 349 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 PRDM4Q9UKN5 801 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 GPR45Q9Y5Y3 372 aa8.42□□□□□ -1.06
USP39-212ENST00000465514 DSPPQ9NZW4 1301 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 A0A096LPE4 126 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ARPC4-TTLL3A0A0A6YYG9 625 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 B4DSR2 109 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 B9A039 149 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 RFXANKO14593 260 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 FRS3O43559 492 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 NPIPB7O75200 414 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 UPK3AO75631 287 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 VAMP5O95183 116 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 STAMBPO95630 424 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 TFPTP0C1Z6 253 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 OR4A8P0C604 315 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CECR9P0C854 216 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ETFAP13804 333 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 PAX7P23759 505 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 EPHA3P29320 983 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CRATP43155 626 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 MVDP53602 400 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 NAAAQ02083 359 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 LARS2Q15031 903 aaKnown RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 ADIPOQQ15848 244 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 PRAMEF8Q5VWM4 474 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 PRAMEF7Q5VXH5 474 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 WDR93Q6P2C0 686 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms