RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TXNDC15Q96J42 360 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 MPP4Q96JB8 637 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 C7orf34Q96L11 122 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 OXGR1Q96P68 337 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SEPHS2Q99611 448 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SF3B5Q9BWJ5 86 aaKnown RBP10.31□□□□□ -0.76
CUX1-207ENST00000465461 ASPNQ9BXN1 380 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 C1orf21Q9H246 121 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 NDUFAF4Q9P032 175 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 RASD1Q9Y272 281 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 ENPP4Q9Y6X5 453 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
CUX1-207ENST00000465461 TCRBV5S2A0A599 114 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 PLPP3O14495 311 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 FZD7O75084 574 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 MT-ND1P03886 318 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 SEMG1P04279 462 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 ZNF43P17038 809 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 CBX1P83916 185 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 SORDQ00796 357 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 FAPQ12884 760 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 BNIP1Q12981 228 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 C1DQ13901 141 aaKnown RBP10.3□□□□□ -0.76
CUX1-207ENST00000465461 TRIM25Q14258 630 aaKnown RBP10.3□□□□□ -0.76
CUX1-207ENST00000465461 IQCCQ4KMZ1 466 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 CARD17Q5XLA6 110 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 FBXW9Q5XUX1 488 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 OFCC1Q8IZS5 231 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 OR6S1Q8NH40 331 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 OR52J3Q8NH60 311 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 S100PBPQ96BU1 408 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 SGTBQ96EQ0 304 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 EMC6Q9BV81 110 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 POLR2J2Q9GZM3 115 aaKnown RBP10.3□□□□□ -0.76
CUX1-207ENST00000465461 ACTR6Q9GZN1 396 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 POLR2J3Q9H1A7 115 aaKnown RBP10.3□□□□□ -0.76
CUX1-207ENST00000465461 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 TAS2R5Q9NYW4 299 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 ACTR3BQ9P1U1 418 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 KCNN3Q9UGI6 736 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 PRPF19Q9UMS4 504 aaKnown RBP10.3□□□□□ -0.76
CUX1-207ENST00000465461 B3GALT5Q9Y2C3 310 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 MED31Q9Y3C7 131 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 TESMINQ9Y4I5 508 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 CACNA1DQ01668 2161 aa10.3□□□□□ -0.76
CUX1-207ENST00000465461 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 A0A087WUU8 490 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 A0A1W2PR80 420 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 UPK3AO75631 287 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 OR7A10O76100 309 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 VAMP5O95183 116 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 MT-ATP6P00846 226 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 THBDP07204 575 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 ADORA3P0DMS8 318 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 THRBP10828 461 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 EPXP11678 715 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 IFI30P13284 250 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 MAKP20794 623 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 DNAJA1P31689 397 aaKnown RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 IFNA8P32881 189 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 ERFP50548 548 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 POU3F1Q03052 451 aaPredicted RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 TRAM2Q15035 370 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 SPATS1Q496A3 300 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 SFRP5Q5T4F7 317 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 Q6ZT83 130 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 LINGO2Q7L985 606 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 CYP4Z1Q86W10 505 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 DHFR2Q86XF0 187 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 UEVLDQ8IX04 471 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 NRMQ8IXM6 262 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 PIK3C3Q8NEB9 887 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 OR5J2Q8NH18 312 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 FAM222BQ8WU58 562 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 TMEM45BQ96B21 275 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 BTBD10Q9BSF8 475 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 MED18Q9BUE0 208 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 SLC19A3Q9BZV2 496 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 FKRPQ9H9S5 495 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 NMNAT1Q9HAN9 279 aaPredicted RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 NANSQ9NR45 359 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 MED29Q9NX70 200 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 MRPL39Q9NYK5 338 aaKnown RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 UPB1Q9UBR1 384 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 NDRG3Q9UGV2 375 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 FAM32AQ9Y421 112 aaKnown RBP10.29□□□□□ -0.76
CUX1-207ENST00000465461 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
CUX1-207ENST00000465461 TRBV4-1A0A0J9YWV2 114 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 BLOC1S5-TXNDC5H3BN57 136 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ACOT8O14734 319 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 GSC2O15499 205 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 SIAH2O43255 324 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 RNF13O43567 381 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 TRAF3IP2O43734 574 aaPredicted RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 RAD51DO75771 328 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 OR6A2O95222 327 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 HIST1H2ABP04908 130 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 F13BP05160 661 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 H1F0P07305 194 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms