RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 GDNFP39905 211 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 CAPZBP47756 277 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 GPLD1P80108 840 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 DYRK1AQ13627 763 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 CCINQ13939 588 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 SLC6A19Q695T7 634 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 C7orf57Q8NEG2 295 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 PELOQ9BRX2 385 aaKnown RBP16.72■□□□□ 0.27
SYNE4-204ENST00000465425 UCKL1Q9NWZ5 548 aa16.72■□□□□ 0.27
SYNE4-204ENST00000465425 TDRD6O60522 2096 aaKnown RBP16.72■□□□□ 0.27
SYNE4-204ENST00000465425 ANKRD61A6NGH8 418 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 C17orf105B2RV13 164 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 ITGA10O75578 1167 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 RPP14O95059 124 aaKnown RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 CD14P08571 375 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 SPTBP11277 2137 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 CTXN1P60606 82 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 CD226Q15762 336 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 ZNF74Q16587 644 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 LINC01590Q5TEZ4 76 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 C9orf62Q8N4C0 152 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 LSM14AQ8ND56 463 aaKnown RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 ZNF431Q8TF32 576 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 TSSK2Q96PF2 358 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 ACTR6Q9GZN1 396 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 WSB2Q9NYS7 404 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 HIF3AQ9Y2N7 669 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 PIN1P1O15428 100 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 PROS1P07225 676 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 SDHAP31040 664 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 NANOS3P60323 173 aaKnown RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 KLF9Q13886 244 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 BTN2A1Q7KYR7 527 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 ATG4DQ86TL0 474 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-204ENST00000465425 GIMAP1Q8WWP7 306 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 SLX1AQ9BQ83 275 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 IRF2BPLQ9H1B7 796 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 GPR27Q9NS67 375 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 MGAT4AQ9UM21 535 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 MOKQ9UQ07 419 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 HEATR5AQ86XA9 2040 aa16.71■□□□□ 0.27
SYNE4-204ENST00000465425 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 WNT1P04628 370 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 ANKRD34CP0C6C1 535 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 RAG2P55895 527 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 GSG1Q2KHT4 349 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 COL13A1Q5TAT6 717 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLC16A9Q7RTY1 509 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 KCTD20Q7Z5Y7 419 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 TIGD4Q8IY51 512 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 FAM71CQ8NEG0 241 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 OR56B4Q8NH76 319 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 ADAD1Q96M93 576 aaKnown RBP16.7■□□□□ 0.26
SYNE4-204ENST00000465425 MOGAT1Q96PD6 335 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLC38A3Q99624 504 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLITRK2Q9H156 845 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 LIN7BQ9HAP6 207 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 PLCL2Q9UPR0 1127 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLC6A5Q9Y345 797 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 V9GY05 133 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 EYSQ5T1H1 3165 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 A0A1W2PPC4 97 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 TMEM72A0PK05 275 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 ERVH48-1M5A8F1 160 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 IGF2P01344 180 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 F13BP05160 661 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 ADRB1P08588 477 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLC25A1P53007 311 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 CBLN3Q6UW01 205 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 ZNF563Q8TA94 476 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 MMP25Q9NPA2 562 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 PNO1Q9NRX1 252 aaKnown RBP16.7■□□□□ 0.26
SYNE4-204ENST00000465425 GRHPRQ9UBQ7 328 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 TMEM184BQ9Y519 407 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-204ENST00000465425 SLCO1B1Q9Y6L6 691 aa16.7■□□□□ 0.26
SYNE4-204ENST00000465425 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 ZNF264O43296 627 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 SSNA1O43805 119 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 OR8G3PP0DMU2 310 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 APEHP13798 732 aaKnown RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 ADH7P40394 386 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 MAGEB1P43366 347 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 SKP2Q13309 424 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 FAM199XQ6PEV8 388 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 ZNF782Q6ZMW2 699 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 FCRLAQ7L513 359 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 FAM122BQ7Z309 247 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 OR7G1Q8NGA0 311 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 OR5AK2Q8NH90 309 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 RPS4Y2Q8TD47 263 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 TSPAN10Q9H1Z9 355 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 SRA1Q9HD15 236 aaKnown RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 ZNF346Q9UL40 294 aaKnown RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 ECDO95905 644 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-204ENST00000465425 IGLV3-19P01714 112 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 CXCL3P19876 107 aa16.69■□□□□ 0.26
SYNE4-204ENST00000465425 MAPK3P27361 379 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms