RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 C3orf49Q96BT1 292 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 AMBRA1Q9C0C7 1298 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 SLCO5A1Q9H2Y9 848 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 NANOGQ9H9S0 305 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 RPS6KB2Q9UBS0 482 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 AP3M1Q9Y2T2 418 aa19.48■□□□□ 0.71
PDLIM7-206ENST00000463411 EVPLLA8MZ36 301 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 B2RBV5 119 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 KRT33AO76009 404 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 NUDT7P0C024 238 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 BMP2P12643 396 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 GPX2P18283 190 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 SLC6A2P23975 617 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 GTF2E2P29084 291 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 PCSK6P29122 969 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 MPGP29372 298 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 FOXG1P55316 489 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 NRF1Q16656 503 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 C16orf89Q6UX73 402 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 LSRQ86X29 649 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 PGAM4Q8N0Y7 254 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 STK35Q8TDR2 534 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 SLC17A5Q9NRA2 495 aa19.47■□□□□ 0.71
PDLIM7-206ENST00000463411 TMEM229AB2RXF0 380 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 WNT11O96014 354 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 ETS2P15036 469 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 SPOCK1Q08629 439 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 GCNT6Q5T4J0 391 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 CCDC121Q6ZUS5 278 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 KRT73Q86Y46 540 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 FBXL14Q8N1E6 418 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 ZNF385AQ96PM9 386 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 DHRS9Q9BPW9 319 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 SPATA5L1Q9BVQ7 753 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 RASD1Q9Y272 281 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 CHST2Q9Y4C5 530 aa19.46■□□□□ 0.71
PDLIM7-206ENST00000463411 ELOA3DA6NLF2 546 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 RNF223E7ERA6 249 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 CD8AP01732 235 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 IGHV4-39P01824 125 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 PRKAR1BP31321 381 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 ACVR1BP36896 505 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 RASSF2P50749 326 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 PRPS1P60891 318 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 PSME3P61289 254 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 ELOA3BQ3SY89 546 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 RBM15BQ8NDT2 890 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 ELOA3Q8NG57 546 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 NFKBIDQ8NI38 313 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 SLC7A6OSQ96CW6 309 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 ADAD1Q96M93 576 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 C1QTNF6Q9BXI9 259 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 FKRPQ9H9S5 495 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 CBLN4Q9NTU7 201 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 ABCD2Q9UBJ2 740 aa19.45■□□□□ 0.7
PDLIM7-206ENST00000463411 OR6C65A6NJZ3 312 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 E7EQL1 145 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 ZNF587BE7ETH6 402 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 CDH2P19022 906 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 TTKP33981 857 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 MXRA7P84157 204 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 SLC15A3Q8IY34 581 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 MUC15Q8N387 334 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 ZIC4Q8N9L1 334 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 WDR31Q8NA23 367 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 MFSD8Q8NHS3 518 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 SLC25A36Q96CQ1 311 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 IKZF5Q9H5V7 419 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 KAT8Q9H7Z6 458 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 TAS2R1Q9NYW7 299 aa19.44■□□□□ 0.7
PDLIM7-206ENST00000463411 FN1P02751 2386 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 HIVEP2P31629 2446 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 NPIPB7O75200 414 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 ARAFP10398 606 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 RPS5P46782 204 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 FABP6P51161 128 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 MTPNP58546 118 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 NCALDP61601 193 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 SLC25A3Q00325 362 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 HOXC5Q00444 222 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 CDK6Q00534 326 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 SELPLGQ14242 412 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 SPATS1Q496A3 300 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 REEP3Q6NUK4 255 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 ZNF544Q6NX49 715 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 NIPAL3Q6P499 406 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 C5orf46Q6UWT4 87 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 RINLQ6ZS11 566 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 NET1Q7Z628 596 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 ARHGAP24Q8N264 748 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 CACNG6Q9BXT2 260 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 REG4Q9BYZ8 158 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 C12orf10Q9HB07 376 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 SPAG4Q9NPE6 437 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 OBP2BQ9NPH6 170 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 GDF2Q9UK05 429 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 B3GALT5Q9Y2C3 310 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 ATP23Q9Y6H3 246 aa19.43■□□□□ 0.7
PDLIM7-206ENST00000463411 ABCA2Q9BZC7 2435 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms