RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 WNT2BQ93097 391 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 KLHL15Q96M94 604 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 CAMK2AQ9UQM7 478 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 MCIDASD6RGH6 385 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 J3QRE1 110 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 PPM1BO75688 479 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 GPANK1O95872 356 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 SQSTM1Q13501 440 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 PCGF3Q3KNV8 242 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 ALG10BQ5I7T1 473 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 DCST2Q5T1A1 773 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 DMKNQ6E0U4 476 aaPredicted RBP11.4□□□□□ -0.59
HDAC4-208ENST00000463007 TPRA1Q86W33 373 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 NRROSQ86YC3 692 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 OR4K14Q8NGD5 310 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 SGTBQ96EQ0 304 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 MED17Q9NVC6 651 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 CLEC1BQ9P126 229 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 FANCMQ8IYD8 2048 aa11.4□□□□□ -0.59
HDAC4-208ENST00000463007 RP1P56715 2156 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 PRSS38A1L453 326 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 DUXAA6NLW8 204 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 NGFRP08138 427 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 LBX1P52954 281 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 SEC13P55735 322 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 SORDQ00796 357 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 LGALS3BPQ08380 585 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 ACSM1Q08AH1 577 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 AMZ1Q400G9 498 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 DCAF12L2Q5VW00 463 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 CCL4L1Q8NHW4 92 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 COPZ2Q9P299 210 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D29Q9UFV1 150 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 KCNAB3O43448 404 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 KLF4O43474 513 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 SMIM10L1P0DMW3 83 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 ACHEP22303 614 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 ITPKBP27987 946 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 STK11Q15831 433 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 TMEM31Q5JXX7 168 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 EXOSC6Q5RKV6 272 aaKnown RBP11.39□□□□□ -0.59
HDAC4-208ENST00000463007 SLC35F2Q8IXU6 374 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 TM4SF19Q96DZ7 209 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 S100A16Q96FQ6 103 aaKnown RBP11.39□□□□□ -0.59
HDAC4-208ENST00000463007 SMIM10Q96HG1 83 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 MS4A4EQ96PG1 132 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 C2orf42Q9NWW7 574 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 GPR160Q9UJ42 338 aa11.39□□□□□ -0.59
HDAC4-208ENST00000463007 MRPS2Q9Y399 296 aaKnown RBP11.39□□□□□ -0.59
HDAC4-208ENST00000463007 POM121BA6NF01 834 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 PIN1P1O15428 100 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 ZFPL1O95159 310 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 CBX7O95931 251 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 EGFP01133 1207 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 GLULP15104 373 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 NTSR1P30989 418 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 CDK5R1Q15078 307 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 PON3Q15166 354 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 METTL11BQ5VVY1 283 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 TOR1AIP2Q8NFQ8 470 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 NT5CQ8TCD5 201 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 CHST6Q9GZX3 395 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 FBRSQ9HAH7 460 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 KIF26BQ2KJY2 2108 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 TMEM72A0PK05 275 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 SLC22A23A1A5C7 686 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 FAM25EA8MYX2 175 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 KHNYNO15037 678 aaKnown RBP11.38□□□□□ -0.59
HDAC4-208ENST00000463007 RP2O75695 350 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 NMBP08949 121 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 EMDP50402 254 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 NANOS3P60323 173 aaKnown RBP11.38□□□□□ -0.59
HDAC4-208ENST00000463007 SHC2P98077 582 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 SGCGQ13326 291 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 HLXQ14774 488 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-208ENST00000463007 SLC6A19Q695T7 634 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 LIN54Q6MZP7 749 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 ASPGQ86U10 573 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 GPAT4Q86UL3 456 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 OR10AC1Q8NH08 325 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 OR14C36Q8NHC7 312 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 STK35Q8TDR2 534 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 OR1E3Q8WZA6 343 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 HGDQ93099 445 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 ST6GALNAC2Q9UJ37 374 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 FBXL3Q9UKT7 428 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 NPFFR2Q9Y5X5 522 aa11.38□□□□□ -0.59
HDAC4-208ENST00000463007 RPL35P42766 123 aaKnown RBP11.38□□□□□ -0.59
HDAC4-208ENST00000463007 H2BFSP57053 126 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms