RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NPTX1Q15818 432 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 Q5PR19 223 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 NCMAPQ5T1S8 102 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TSPO2Q5TGU0 170 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 NIPAL3Q6P499 406 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 ABHD12BQ7Z5M8 362 aaPredicted RBP13.55□□□□□ -0.24
VARS-219ENST00000461328 CARM1Q86X55 608 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TREML1Q86YW5 311 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 KDM8Q8N371 416 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 OR4D11Q8NGI4 311 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 ADAMTS16Q8TE57 1224 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TMEM171Q8WVE6 324 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 CMTM5Q96DZ9 223 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 PERPQ96FX8 193 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TMEM43Q9BTV4 400 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 SLC7A10Q9NS82 523 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 SLC7A7Q9UM01 511 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 CORINQ9Y5Q5 1042 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 OR5H1A6NKK0 313 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 KPNA4O00629 521 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 AKAP8O43823 692 aaKnown RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 FOSL1P15407 271 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 SELENOPP49908 381 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 CRYBA2P53672 197 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 CLDN17P56750 224 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 TAS2R41P59536 307 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 LIPEQ05469 1076 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 PMS2P3Q13401 168 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 CYBRD1Q53TN4 286 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 TTC33Q6PID6 262 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 KLHL24Q6TFL4 600 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 H1FNTQ75WM6 255 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 ZNF611Q8N823 705 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 OR52N5Q8NH56 324 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 DLL4Q9NR61 685 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 B3GALT5Q9Y2C3 310 aa13.54□□□□□ -0.24
VARS-219ENST00000461328 RAI1Q7Z5J4 1906 aaPredicted RBP13.54□□□□□ -0.24
VARS-219ENST00000461328 A0A1W2PR80 420 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 ZNF587BE7ETH6 402 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 SHOX2O60902 331 aaPredicted RBP13.53□□□□□ -0.24
VARS-219ENST00000461328 BGLAPP02818 100 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 ITGA5P08648 1049 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 MPGP29372 298 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 KDELR2P33947 212 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 FOXG1P55316 489 aaPredicted RBP13.53□□□□□ -0.24
VARS-219ENST00000461328 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 SEZ6L2Q6UXD5 910 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 SSX8Q7RTT4 187 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 UEVLDQ8IX04 471 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 SLC15A3Q8IY34 581 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 LZICQ8WZA0 190 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 SLC41A3Q96GZ6 507 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 MOGAT1Q96PD6 335 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
VARS-219ENST00000461328 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 OR6C65A6NJZ3 312 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 NME4O00746 187 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 NDUFAB1O14561 156 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 SLC43A1O75387 559 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 SERPINI2O75830 405 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 OR6A2O95222 327 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 MT-ATP6P00846 226 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 PRDX6P30041 224 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 OR1E2P47887 323 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 PTH2RP49190 550 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 GABRA6Q16445 453 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 HMBOX1Q6NT76 420 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 ADAM5Q6NVV9 412 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 KLHL17Q6TDP4 642 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 HACD2Q6Y1H2 254 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 WDR88Q6ZMY6 472 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 YTHDF3Q7Z739 585 aaKnown RBP13.52□□□□□ -0.25
VARS-219ENST00000461328 SCAIQ8N9R8 606 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 ADPRHL1Q8NDY3 354 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 C1orf162Q8NEQ5 155 aaPredicted RBP13.52□□□□□ -0.25
VARS-219ENST00000461328 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 FBXW5Q969U6 566 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 MPP4Q96JB8 637 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 KCTD14Q9BQ13 255 aaPredicted RBP13.52□□□□□ -0.25
VARS-219ENST00000461328 GSX2Q9BZM3 304 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 ALG2Q9H553 416 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms