RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 GABRA6Q16445 453 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 C9orf135Q5VTT2 229 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 NIPAL3Q6P499 406 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 LINC00114Q6XXX2 140 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 ABHD12BQ7Z5M8 362 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-207ENST00000461195 MICU2Q8IYU8 434 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 ADPRHL1Q8NDY3 354 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 C1orf162Q8NEQ5 155 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-207ENST00000461195 PIGTQ969N2 578 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 MUS81Q96NY9 551 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 HOPXQ9BPY8 73 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-207ENST00000461195 ASPNQ9BXN1 380 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 MYLK2Q9H1R3 596 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 CMTM6Q9NX76 183 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 SH3GLB1Q9Y371 365 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 RNF115Q9Y4L5 304 aa19.79■□□□□ 0.76
TRAF4-207ENST00000461195 PRRC2AP48634 2157 aaKnown RBP19.78■□□□□ 0.76
TRAF4-207ENST00000461195 DSCAMO60469 2012 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 ELOVL7A1L3X0 281 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 OR6C65A6NJZ3 312 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 KRT33AO76009 404 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 BGLAPP02818 100 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 KDELR2P33947 212 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 SELENOPP49908 381 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 GYS2P54840 703 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 IL1RL1Q01638 556 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 CARM1Q86X55 608 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 SLC15A3Q8IY34 581 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 C10orf53Q8N6V4 93 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 SCAIQ8N9R8 606 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 CMTM5Q96DZ9 223 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 CCL19Q99731 98 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 PIP5K1AQ99755 562 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 AMBRA1Q9C0C7 1298 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 B3GAT1Q9P2W7 334 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 SLC7A7Q9UM01 511 aa19.78■□□□□ 0.76
TRAF4-207ENST00000461195 MAP1AP78559 2803 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-207ENST00000461195 LOC102725191A0A1B0GVB3 256 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 HS3ST1O14792 307 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 LYPD3O95274 346 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 THY1P04216 161 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 NQO1P15559 274 aaKnown RBP19.77■□□□□ 0.76
TRAF4-207ENST00000461195 CLDN17P56750 224 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 GNGT1P63211 74 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 LTBQ06643 244 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 BSPH1Q075Z2 132 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 C1DQ13901 141 aaKnown RBP19.77■□□□□ 0.76
TRAF4-207ENST00000461195 LRRC23Q53EV4 343 aaPredicted RBP19.77■□□□□ 0.76
TRAF4-207ENST00000461195 TTC33Q6PID6 262 aaPredicted RBP19.77■□□□□ 0.76
TRAF4-207ENST00000461195 HACD2Q6Y1H2 254 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 WDR88Q6ZMY6 472 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 TSPYL5Q86VY4 417 aaPredicted RBP19.77■□□□□ 0.76
TRAF4-207ENST00000461195 C17orf78Q8N4C9 275 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 OR52N5Q8NH56 324 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 SLC41A3Q96GZ6 507 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 MPP4Q96JB8 637 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 MOGAT1Q96PD6 335 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 RCE1Q9Y256 329 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 SLC25A15Q9Y619 301 aa19.77■□□□□ 0.76
TRAF4-207ENST00000461195 DPRXA6NFQ7 191 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 CLOCKO15516 846 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 TNFRSF1BP20333 461 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 NUDT2P50583 147 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 LIPEQ05469 1076 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 CYBRD1Q53TN4 286 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 ADAM5Q6NVV9 412 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 C8orf82Q6P1X6 216 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-207ENST00000461195 AKAP1Q92667 903 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRAF4-207ENST00000461195 LINC00470Q9BZP3 86 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 MRPL39Q9NYK5 338 aaKnown RBP19.76■□□□□ 0.75
TRAF4-207ENST00000461195 NPAP1Q9NZP6 1156 aa19.76■□□□□ 0.75
TRAF4-207ENST00000461195 ROS1P08922 2347 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF587BE7ETH6 402 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 MS4A18H0YCH9 400 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 MT-ATP6P00846 226 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 PRDX6P30041 224 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 SLC7A2P52569 658 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 LGALS3BPQ08380 585 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 PMS2P3Q13401 168 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 MS4A18Q3C1V0 323 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 UEVLDQ8IX04 471 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF611Q8N823 705 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 POLR2J2Q9GZM3 115 aaKnown RBP19.75■□□□□ 0.75
TRAF4-207ENST00000461195 POLR2J3Q9H1A7 115 aaKnown RBP19.75■□□□□ 0.75
TRAF4-207ENST00000461195 SLC17A5Q9NRA2 495 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 AMDHD2Q9Y303 409 aa19.75■□□□□ 0.75
TRAF4-207ENST00000461195 A0A1W2PR80 420 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 LRRN3E7EW58 273 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 NME4O00746 187 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 NDUFAB1O14561 156 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 AKAP8O43823 692 aaKnown RBP19.74■□□□□ 0.75
TRAF4-207ENST00000461195 SMPD2O60906 423 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 SLC43A1O75387 559 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 UPK3AO75631 287 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF432O94892 652 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 CDH2P19022 906 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-207ENST00000461195 HOXC12P31275 282 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 TAS2R41P59536 307 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 C1QTNF12Q5T7M4 302 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 KLHL17Q6TDP4 642 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms