RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 MICBQ29980 383 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 TTLL9Q3SXZ7 439 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 TMEM225Q6GV28 225 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 CES3Q6UWW8 571 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 GET4Q7L5D6 327 aaPredicted RBP0.69□□□□□ -2.3
PTPN22-203ENST00000460620 RIMKLAQ8IXN7 391 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 BCORP1Q8N888 145 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 OR4K14Q8NGD5 310 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 PHOSPHO2Q8TCD6 241 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 ACOT11Q8WXI4 607 aaPredicted RBP0.69□□□□□ -2.3
PTPN22-203ENST00000460620 FGF11Q92914 225 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 L3HYPDHQ96EM0 354 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 SMIM10Q96HG1 83 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 ITCHQ96J02 903 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 CCDC43Q96MW1 224 aaKnown RBP0.69□□□□□ -2.3
PTPN22-203ENST00000460620 KLF6Q99612 283 aaPredicted RBP0.69□□□□□ -2.3
PTPN22-203ENST00000460620 CCT7Q99832 543 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 RNF5Q99942 180 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 HMG20AQ9NP66 347 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 STAP1Q9ULZ2 295 aa0.69□□□□□ -2.3
PTPN22-203ENST00000460620 SAMHD1Q9Y3Z3 626 aaKnown RBP0.69□□□□□ -2.3
PTPN22-203ENST00000460620 IGHV5-10-1A0A0J9YXX1 117 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 SYCE3A1L190 88 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 K7EM74 188 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CLDN5O00501 218 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RS1O15537 224 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CHST1O43916 411 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 UGT1A9O60656 530 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CA1P00915 261 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 GLAP06280 429 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 COX5AP20674 150 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 AP3M2P53677 418 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 PITPNAQ00169 270 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 MEF2CQ06413 473 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 ACTN3Q08043 901 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CDC20Q12834 499 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NIPAL3Q6P499 406 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NTM-AS1Q6ZSK4 140 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 IQCA1Q86XH1 822 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 MIR7-3HGQ8N6C7 128 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 ATP6V0D2Q8N8Y2 350 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CNNM3Q8NE01 707 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 OR5L2Q8NGL0 311 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RNF139Q8WU17 664 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RTN4IP1Q8WWV3 396 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 KRT35Q92764 455 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CABS1Q96KC9 395 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 C12orf66Q96MD2 445 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CHAC1Q9BUX1 264 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 SLCO1B3Q9NPD5 702 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 FANCIQ9NVI1 1328 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 TENM1Q9UKZ4 2725 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 ARPC4-TTLL3A0A0A6YYG9 625 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LOC110117498-PIK3R3F6TDL0 507 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 G3V4G9 280 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 H0YHG0 523 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RAD51BO15315 384 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 ZNF207O43670 478 aaKnown RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CCNKO75909 580 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 SLC25A14O95258 325 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CSF3P09919 207 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 GKN3PP0CG01 181 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CCDC192P0DO97 292 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NPR2P20594 1047 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 PTGFRP43088 359 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NAMPTP43490 491 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 CX3CR1P49238 355 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 FGF8P55075 233 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RPS14P62263 151 aaKnown RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 EWSR1Q01844 656 aaKnown RBP eCLIP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 TNFRSF17Q02223 184 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LOXL1Q08397 574 aaPredicted RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 ASPHQ12797 758 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LCN12Q6JVE5 192 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LRRC8BQ6P9F7 803 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 TRIM69Q86WT6 500 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LRRC43Q8N309 656 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 LRRC58Q96CX6 371 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 PELI1Q96FA3 418 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 RUFY1Q96T51 708 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NIPSNAP3BQ9BS92 247 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 GSDMCQ9BYG8 508 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 XPO4Q9C0E2 1151 aaKnown RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 YAE1D1Q9NRH1 226 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 KCNIP1Q9NZI2 227 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 COPS3Q9UNS2 423 aa0.68□□□□□ -2.3
PTPN22-203ENST00000460620 F11RQ9Y624 299 aaKnown RBP0.68□□□□□ -2.3
PTPN22-203ENST00000460620 NSG1A0A0A6YYJ2 146 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 A0A1B0GW55 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 GSAPA4D1B5 854 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RBMY1BA6NDE4 496 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RBMY1EA6NEQ0 496 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NPIPA7E9PJI5 369 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DNASE2O00115 360 aaPredicted RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 SGK1O00141 431 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 TRIM16O95361 564 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 ALDOBP05062 364 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RBMY1DP0C7P1 496 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4L2P0CJ85 424 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms