RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FBXL2Q9UKC9 423 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SSX5O60225 188 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 CBX7O95931 251 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 F13BP05160 661 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 IGHV4-34P06331 123 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SLC35E2P0CK97 266 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 HOXA1P49639 335 aaPredicted RBP14.16□□□□□ -0.14
LMNB1-203ENST00000460265 TMEM44Q2T9K0 475 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 OR5W2Q8NH69 310 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SMPDL3BQ92485 455 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 LMF1Q96S06 567 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 TRIM2Q9C040 744 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 LYRM4Q9HD34 91 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 KCNE5Q9UJ90 142 aa14.16□□□□□ -0.14
LMNB1-203ENST00000460265 SCDO00767 359 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 THY1P04216 161 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 C4BPBP20851 252 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 LTBRP36941 435 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 ARHGDIBP52566 201 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 BTG1P62324 171 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 NSDHLQ15738 373 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 ETFDHQ16134 617 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 PRICKLE4Q2TBC4 344 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 C3P1Q6ZMU1 363 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 JAZF1Q86VZ6 243 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 CXorf58Q96LI9 332 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 NMNAT3Q96T66 252 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 GHITMQ9H3K2 345 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 PTTG3PQ9NZH4 202 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 DTX4Q9Y2E6 619 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 DVL2O14641 736 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 PLGP00747 810 aaPredicted RBP14.15□□□□□ -0.14
LMNB1-203ENST00000460265 SDHBP21912 280 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 EDNRAP25101 427 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 SOX2P48431 317 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 FOXL2P58012 376 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 NTRK2Q16620 822 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 OR13C5Q8NGS8 318 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 SFXN2Q96NB2 322 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 GAS2L1Q99501 681 aaPredicted RBP14.15□□□□□ -0.14
LMNB1-203ENST00000460265 TEAD3Q99594 435 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 OR10A5Q9H207 317 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF768Q9H5H4 540 aaKnown RBP14.15□□□□□ -0.14
LMNB1-203ENST00000460265 PPP1R3EQ9H7J1 279 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 TMEM5Q9Y2B1 443 aa14.15□□□□□ -0.14
LMNB1-203ENST00000460265 NOSIPQ9Y314 301 aaKnown RBP14.15□□□□□ -0.14
LMNB1-203ENST00000460265 SLC22A31A6NKX4 558 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 H7C1C5 153 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 YKT6O15498 198 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 HTR1FP30939 366 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 LCN6P62502 163 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 OPCMLQ14982 345 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 PRAMEF8Q5VWM4 474 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 PRAMEF7Q5VXH5 474 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 C16orf52Q8NHV5 167 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF350Q9GZX5 532 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 CBLCQ9ULV8 474 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 A0A1W2PPC4 97 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 CYR61O00622 381 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 SLC25A12O75746 678 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 CPEP16870 476 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 IL12BP29460 328 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 GABRA5P31644 462 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 LGALS3BPQ08380 585 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 MOSPD2Q8NHP6 518 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ORAI1Q96D31 301 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 PILRAQ9UKJ1 303 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 USP34Q70CQ2 3546 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF136P52737 540 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 TMEM201Q5SNT2 666 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF322Q6U7Q0 402 aaPredicted RBP14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ATRAIDQ6UW56 229 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ALKAL2Q6UX46 152 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF550Q7Z398 422 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 TMEM151BQ8IW70 566 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 GPBAR1Q8TDU6 330 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 SENP5Q96HI0 755 aaPredicted RBP14.14□□□□□ -0.15
LMNB1-203ENST00000460265 NARS2Q96I59 477 aaKnown RBP14.14□□□□□ -0.15
LMNB1-203ENST00000460265 ARHGAP9Q9BRR9 750 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 NANSQ9NR45 359 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 SLC2A4RGQ9NR83 387 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 KIF25Q9UIL4 384 aa14.14□□□□□ -0.15
LMNB1-203ENST00000460265 LINC00587B1AMM8 73 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 OR6A2O95222 327 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 FAM157BP0CG42 384 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 NR0B1P51843 470 aaKnown RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ZP2Q05996 745 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 VWA2Q5GFL6 755 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ARHGAP40Q5TG30 622 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 MED25Q71SY5 747 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TMPRSS9Q7Z410 1059 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF764Q96H86 408 aaPredicted RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TSSK2Q96PF2 358 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TBL1XR1Q9BZK7 514 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TMEM129A0AVI4 362 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 PRAMEF2O60811 474 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ADAM11O75078 769 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 RPS27P42677 84 aaKnown RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 OR1D5P58170 312 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms